KEGG   Populus trichocarpa (black cottonwood): 18105080
Entry
18105080          CDS       T01077                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03013  Nucleocytoplasmic transport
pop03015  mRNA surveillance pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18105080
  09122 Translation
   03013 Nucleocytoplasmic transport
    18105080
   03015 mRNA surveillance pathway
    18105080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    18105080
   03041 Spliceosome [BR:pop03041]
    18105080
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     18105080
Spliceosome [BR:pop03041]
 Complex C
  Other components
   EJC/TREX
    18105080
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 18105080
NCBI-ProteinID: XP_006375160
UniProt: A9P9K6
LinkDB
Position
14:3198284..3200534
AA seq 152 aa
MAAMEEDNGEFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTP
AVLKECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVHSSQ
DPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 459 nt   +upstreamnt  +downstreamnt
atggcagcgatggaggaagataacggagagttctatcttcgttactacgttggtcacaga
ggtaaattcggtcacgaattcttggaattcgagttccggcctgatggaaaactccgatac
gcaaacaactctaattacaaaaacgacaccatgattcgtaaagaagtctttcttaccccc
gccgttctcaaagagtgccgccgcatcatctccgagagcgagattatgaaggaagatgac
aacaactggccagagccggaccgggttgggaggcaagagctggagattgtgatggggaat
gagcatatttcatttactacgtctaagattggatcacttgttgatgttcacagtagccag
gatcctgaagggcttcgcatcttctattatcttgttcaggacttgaagtgctttgttttc
tctctcatctccctccacttcaaaatcaagcccatataa

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