Populus trichocarpa (black cottonwood): 18105105
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Entry
18105105 CDS
T01077
Name
(RefSeq) metacaspase-1
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18105105
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C14: caspase family
18105105
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GFIT
Motif
Pfam:
Peptidase_C14
zf-LSD1
C1_1
TRAF6_Z2
DZR
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
18105105
NCBI-ProteinID:
XP_006375191
UniProt:
A9PFA4
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All DBs
Position
14:3362932..3366947
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AA seq
366 aa
AA seq
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MYSYMLVNCSKCQTPLQLPPGAESIRCVICQAVTHVAVHSRHAPPPSNPTTRPPPSTLAP
PSPYNHAPPGPPPNQHGRKKAVIVGISYKYSRHELKGCINDAKCMRHLLMSKFQFPQDSI
LMLTEEETDPYRIPNKQNMRMALFWLVQGCQPGDSLLFHYSGHGSRQRNYNGDEVDGYDE
TLCPLDFETQGMIVDDEINATIVRPLPHGVRLHAMIDACHSGTVLDLPFLCRMDRNGQYV
WEDHRPRSGIWKGTNGGDVISLSGCDDDQTSADTSALSKITSTGAMTFCFIQAIERGHGT
TYGSILNSMRTAIRNTGGNNLGGGDVVTSLIGMLLTGGSGGGGGLRQEPQLTSCEPFDVY
TRPFSL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtatagttacatgcttgtaaattgttccaaatgccagactccgctccagctacccccg
ggtgccgaatccatccgctgtgttatctgtcaagctgtaactcacgtcgctgtccactct
cgccatgctcctccaccatcaaaccccaccactcgtcctcctccttcgacgctcgcacca
ccgtccccctacaaccacgcgccaccgggccctccaccaaaccaacacggaagaaaaaag
gcagttattgttgggatttcgtacaagtactcgaggcacgagttaaaggggtgtatcaat
gatgcaaagtgcatgcgtcatcttttgatgagcaagtttcagttccctcaagattctatt
ctcatgttaactgaagaagaaactgacccctacagaattcccaacaaacaaaacatgagg
atggcattattttggcttgtacaaggttgtcaacctggagattccttgctttttcactat
tctggacatggttcaaggcaaagaaattataatggtgatgaggttgatgggtatgatgaa
actctatgtccacttgactttgaaactcaaggtatgattgttgatgatgaaatcaatgca
acaattgtcagacctcttcctcatggtgttaggcttcacgcaatgattgatgcttgccat
agtggcactgtattggatctacccttcctttgcagaatggacaggaacgggcagtatgta
tgggaggaccatcgtccgcgatcaggtatatggaaagggacaaatggtggagatgtcatt
tctttaagtggttgtgatgacgatcaaacctctgctgatacatctgctttatcaaagata
acttcgacaggtgcaatgaccttttgcttcatccaagccattgagcgtggacatggcact
acgtatgggagcattctaaactcaatgcgtaccgctattcgaaatactggtggtaataac
cttggcgggggggatgttgtgacatctctcatcggcatgctcttgacaggaggcagtggt
ggtggtggtgggctgagacaggagccacagctaacttcttgcgagccttttgatgtttat
acaagaccgttttctctttaa
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