Populus trichocarpa (black cottonwood): 18105168
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Entry
18105168 CDS
T01077
Name
(RefSeq) T-complex protein 1 subunit alpha
KO
K09493
T-complex protein 1 subunit alpha
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
18105168
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pop03037
]
18105168
04147 Exosome [BR:
pop04147
]
18105168
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP60 / Chaperonin
18105168
Cilium and associated proteins [BR:
pop03037
]
Primary cilia and associated proteins
BBS-CCT complex
18105168
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18105168
Exosomal proteins of colorectal cancer cells
18105168
Exosomal proteins of bladder cancer cells
18105168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7354
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-GeneID:
18105168
NCBI-ProteinID:
XP_006375264
UniProt:
B9MUZ2
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All DBs
Position
14:3738601..3744393
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AA seq
546 aa
AA seq
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MSIAAQTLDILGDRQSGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITND
GATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVASELLKRANDLVRNGIHPTSI
ISGYRLAMREACKYVEEKLAVKVEKLGKDSLVNCAKTSMSSKLIGGDSDFFANLVVDAVQ
SVKMTNVRGEVRYPIKGINILKAHGKSVKDSYLLNGYALNTGRAAQGMLMKVAPARVACL
DFNLQKTKMQLGVQVLVTDPRELDKIRQREADMTKERIEKLLKAGANVVLTTKGIDDMAL
KYFVEAGAIAVRRVRKEDMRHVAKATGATLVSTFADMEGEETFEPSFLGYADEVVEERIA
DDDVILIKGTKNTSAVSLVLRGANDYMLDEMERALHDALSIVKRTLESNTVVAGGGAVES
ALSVYLEYLATTLGSREQLAIAEFAESLLIIPKVLAVNAAKDATELVAKLRAYHHTAQTK
ADKKQLSSMGLDLLKGTVRNNLEAGVIEPAMSKVKIIQFATEAAITILRIDDMIKLVKDE
SQNDEQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcgccgctcagacacttgatattctcggcgatagacagtccggccaggacgtt
cgcactcaaaacgtgatggcttgtcaagcagtcgccaatattgttaaatcttccctcggt
cctgttggcctcgacaagatgctggtggatgatattggagatgtaacgattaccaatgac
ggtgcgactattcttaagatgttagaagtagagcacccggctgctaaggtgcttgtggag
ttggctgagcttcaagaccgagaagttggagatgggacaacttcagttgttattgtagct
tcagagttgcttaagagagcaaatgatctagtgaggaatgggattcaccctacttctata
atcagtggatatagacttgctatgagggaagcatgcaaatatgttgaagaaaaattggca
gtgaaggttgaaaagcttggaaaagactctttggtaaactgtgccaagacaagtatgtcc
tcaaagctgataggcggtgacagtgacttctttgctaatttggttgttgacgctgtacaa
tcagtaaagatgaccaatgtaagaggggaagtcagataccccatcaagggcatcaatatt
ttgaaagctcatggcaagagtgtgaaggatagctaccttttgaatggatatgctctaaat
accggtcgtgctgctcaaggaatgcttatgaaagtcgcacctgcaagagttgcgtgcctt
gacttcaatcttcagaagacaaagatgcaattgggtgtacaagtcttggtcactgatcct
agggagcttgataaaattcgtcaaagagaagctgatatgacaaaggaacgcattgagaaa
ctcttgaaagctggagcaaatgttgtattaactacaaaaggaattgatgacatggccctt
aagtattttgtggaggctggggcaattgctgtgagacgtgttaggaaggaggatatgcgc
catgtcgccaaggcaactggtgcaacattggtttcaacatttgctgatatggaaggggag
gaaacatttgagccatcatttctgggatatgctgatgaagttgtagaggagcgaattgct
gatgatgatgttattctgattaaggggacaaaaaatactagtgcagtctccttggttctc
cgaggtgcaaacgattatatgcttgatgagatggagagggcacttcatgatgccttatct
attgttaagaggacacttgaatctaatacggtagtagcaggaggaggggcggttgagtct
gccttatctgtgtatttggagtaccttgctacaactctgggatcacgagaacagttggca
attgctgagtttgctgaatctttattaattataccaaaggtgcttgctgtcaatgctgct
aaggatgccaccgagttagttgctaaactacgcgcttaccaccacacagctcaaacaaag
gctgataaaaagcagttgtccagcatgggactagatcttttaaaggggactgttcgcaac
aacttagaagctggagtaattgagcctgccatgagcaaagtgaagataattcagtttgcc
actgaagcagcgataactattcttcggatcgatgacatgatcaagcttgtcaaagatgag
agccagaatgatgagcaatag
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