Populus trichocarpa (black cottonwood): 18105227
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Entry
18105227 CDS
T01077
Name
(RefSeq) signal peptide peptidase-like 4 isoform X1
KO
K09597
signal peptide peptidase-like 2B [EC:3.4.23.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18105227
Peptidases and inhibitors [BR:
pop01002
]
Aspartic peptidases
Family A22: presenilin family
18105227
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Motif
Pfam:
Peptidase_A22B
PA
Motif
Other DBs
NCBI-GeneID:
18105227
NCBI-ProteinID:
XP_006375345
UniProt:
U5FV14
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Position
14:5485809..5493934
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AA seq
539 aa
AA seq
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MNICKNKYVFIVVLASSFCFGSASDIVHQDDVAPKRPGCENNFVLVKVPTYINDVEDIEY
VGVGARFGLTLESKEKHANLSTLALADPPDCCSKPRNKLSGEVILAYRGNCSFTAKANVA
EDAGASAILIINNRTELFKMVCEVNETDVKIGIAAVMLPQDAGASLEKYLTSSSTVKVQL
YSPRRPVVDVAEVFLWLMAVGTILCASYWSAWSAREAAIEQDKLLKDGSDEFIDMDGVRS
SGIVNINTASAVLFVVIASCFLIMLYKLMSYWFIEVLVVLFCIGGVEGLQTCLVALLSCF
RWFQPAGESFIKVPFFGAVSYLTLAVSPFCIAFAVVWAVFRRVSFAWIGQDILGIVLIIT
VLQIVRVPNLKVGTVLLSCAFLYDIFWVFVSKWWFKESVMIVVARGDKSGEDGIPMLLKI
PRMFDPWGGYSIIGFGDIILPGLLVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLITYL
ALNMMDGHGQPALLYIVPFTLGTFLTLGRRRGDLKTLWTMGEPERHCPHIQFQPPGSQQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgtaaaaataagtatgtatttatagttgttttagcttcaagcttttgtttt
ggatcagctagtgatatagtgcaccaggacgacgtcgctccaaagcggcctggctgtgaa
aataatttcgttctggtcaaagtaccaacttatattaatgacgtagaagacattgagtat
gttggtgttggtgctcgttttggcctcactttggaatctaaggaaaaacatgcgaattta
tctacacttgctctggctgaccctcctgattgttgcagcaaacccagaaataagctttca
ggggaggtgatcttggcttaccgaggtaactgtagcttcacagcgaaggcaaatgttgct
gaagatgctggtgcttcagctattcttatcataaacaaccggacagaactcttcaagatg
gtttgtgaagtcaatgaaactgatgtaaagattggcattgctgctgtcatgctcccacaa
gatgctggtgcaagcttggaaaaatatttgacgagcagctccacagttaaagtgcagtta
tactctccacgacgtccagtggtagatgttgcagaagtgttcttatggctcatggctgtt
ggcaccattttatgtgcttcctactggtccgcgtggagtgctagagaagctgctatagag
caggataagctattaaaggatggttcggatgaatttatagatatggatggtgttcgctct
agtggtattgttaacatcaacacagcatctgcagttctctttgtcgtgattgcttcatgt
ttcttgattatgctttacaagcttatgtcatactggtttattgaggttctggtggttctg
ttctgcattgggggagtggagggcttgcaaacttgcttggttgctttattatcatgtttc
agatggtttcaacctgctggagaatcatttattaaagttcccttctttggagctgtctca
tatctgactttggcagtctctcctttctgcatagcatttgctgttgtttgggcagttttc
cgccgtgtctcctttgcttggattggtcaagatatccttggtattgttctgatcattact
gttcttcagattgttcgtgtgcccaatctcaaggtgggaacagttcttctaagttgtgcc
tttttgtatgacatcttctgggtttttgtttccaaatggtggttcaaggagagtgtgatg
atagtggtagctcgtggtgataagagtggagaggatggtataccaatgctactgaaaatc
ccacggatgtttgatccttggggtggctatagcataattgggtttggtgacatcatctta
ccaggattgcttgtagctttttcattgagatatgattggcttgcaaagaagaatcttcga
gccggatacttcttgtgggcaatgactgcttatggtttaggtctcctaataacatacttg
gctttgaacatgatggatgggcatggccagccagctttgctttacattgttccattcacc
cttggtacgtttctgacgctgggaaggcgacgaggtgatctcaaaacattatggacaatg
ggagaacctgaaaggcactgcccgcacatccaatttcaaccccctggctctcaacaataa
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