Populus trichocarpa (black cottonwood): 18105244
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Entry
18105244 CDS
T01077
Name
(RefSeq) auxin response factor 18 isoform X2
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18105244
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GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
18105244
NCBI-ProteinID:
XP_006375372
UniProt:
A0A3N7G1X2
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Position
14:6602998..6607708
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AA seq
689 aa
AA seq
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MAHAERGDDLYSELWKACAGPLVDVPKAGERVFYFPQGHMEQLEASTNQELNQQIPRFNL
PPKILCRVVNIQLLAEQDTDEVYAQITLHPEVDQTRPTSPDPCPPEPAKQTVHSFCKILT
ASDTSTHGGFSVLRKHATECLPPLDMSQATPTQELAARDLHGYEWRFKHIFRGQPRRHLL
TTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGLRRVARQQCSIPSSVISSQSMHLGVLAT
ASHAVLTHTLFVVYYKPRTNQYIIGLNKYLEAVKNGFSVGMRFKMRFEGEDTPERRFTGT
IVGVGDISPEWSGSIWRSLKIQWDEPATIQRPERVSPWDIEPFAAPASPNLTQQVVKSKR
PRSVDIPTSEITTNPAASAFWYHGPTQSRELVQRGSITEVQSSESHVWSMRQKEIDSNLN
NNGSCNSRARPEGIWPSSSHMNVSLNFFPDSAADNKCAKTQSIISGFASSISRQSNGLIN
EQVERGRKFENSVGCRLFGIDLTSNSGIAAVPEKEPAYPIVDYNGTQGLVPASSEAEKAQ
TMDVSMSSKEQKQVVPDTLAKESQSKQGSTTSTRTRTKVQMQGVAVGRALDLTVLKGYKD
LINELEKMFETGGELSTREKWAVVFTDNEGDMMLVGDDPWPEFCKMVKKIFIYSSEEVKK
MSTRCKLPASSFEGEGTVVSMESEHKSDA
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgctgaaagaggtgatgatctgtattcagagctatggaaggcatgtgcaggg
ccattggtggatgtcccgaaggctggagagagagttttttactttcctcaaggtcacatg
gaacaattagaagcatcaacaaatcaagaactgaaccagcaaatcccacggtttaatctt
cctcctaagatcctttgtcgtgttgtaaacattcaacttctggctgaacaggacacggat
gaggtttatgctcagattactctgcacccagaagtagatcaaaccagacctacaagtcca
gacccttgtccacccgagccggcaaagcaaacagttcattccttttgcaaaattctaaca
gcttctgatactagcacccatggaggtttctctgttctccgaaagcatgcaactgaatgc
ttgcctcctttggacatgagccaagcaacgcctactcaggaactggctgccagagatctt
catggctatgagtggcggttcaagcatatatttagaggtcaaccacggaggcatttgctt
acaacaggatggagcacatttgtcacttccaaaagactggttgcaggagattcttttgtg
tttcttagaggtgataatggggaattgcgagttgggcttcggcgtgttgctcgtcagcaa
tgctccattccgtcatctgtgatatccagccaaagcatgcatttaggagtgcttgcgact
gcctctcatgctgttttgacacacactctctttgttgtgtactacaagccaaggacgaac
cagtatatcattgggctgaacaaatatctggaggctgttaagaatggattttctgttggt
atgcgcttcaagatgagatttgagggagaggatactcctgagagaaggttcacaggcacc
atagttggagttggagatatttctccagagtggtctggttctatatggcggtcgttgaag
attcaatgggatgaaccagcaacaattcaaaggccagagagagtttctccatgggacata
gagccttttgcagctcctgcttccccaaatcttactcaacaggtggtgaagagcaaaagg
ccccgatccgtggatattcctacatctgagattacaacaaatccagctgcttcagctttc
tggtaccatggaccaacccaatctcgtgagttagtccaacgagggagtattactgaagtc
caaagctctgaaagccatgtctggtctatgaggcagaaggaaattgatagcaatctcaat
aataacggtagctgtaactcaagggcacgaccagaaggaatctggccttcttcatctcac
atgaacgtctctctcaacttttttccagattcagcagcggacaacaaatgtgctaaaaca
cagtctattatctctggttttgcctcttctatatcaaggcaaagcaatggcctgataaat
gagcaggtggagagggggagaaagttcgagaactctgtaggttgccggttgtttggaatt
gatctgacaagtaactctggcattgctgctgttccagagaaggaacctgcatatccaatt
gttgattataatggaacccaaggacttgttccagcttcaagtgaggctgagaaggctcaa
accatggatgtttcaatgtcctcaaaagaacagaagcaagttgtaccagacacattggca
aaggagtcacaaagcaagcaaggctccacaacctccacgagaactcgtaccaaggtgcaa
atgcaaggggttgctgttggccgcgctcttgatttaactgtgttgaaggggtacaaggat
cttataaatgagctggagaaaatgttcgaaactggaggagaactttccacgcgtgaaaaa
tgggctgttgtgtttacagataatgagggcgatatgatgcttgtgggcgatgatccatgg
cctgagttctgtaagatggtgaagaagatattcatatattcaagtgaggaagtaaagaag
atgagcacacgatgcaagcttcctgcatcttcttttgagggtgaagggactgttgtaagc
atggagtcggagcacaagtctgatgcatga
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