Populus trichocarpa (black cottonwood): 18105286
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Entry
18105286 CDS
T01077
Name
(RefSeq) poly [ADP-ribose] polymerase 2
KO
K28005
poly [ADP-ribose] polymerase 2 [EC:
2.4.2.30
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
18105286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pop03032
]
18105286
03036 Chromosome and associated proteins [BR:
pop03036
]
18105286
03400 DNA repair and recombination proteins [BR:
pop03400
]
18105286
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
18105286
DNA replication proteins [BR:
pop03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
18105286
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
18105286
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
18105286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
WGR
SAP
WHD_Fungal_DR
Motif
Other DBs
NCBI-GeneID:
18105286
NCBI-ProteinID:
XP_006375453
LinkDB
All DBs
Position
14:8592209..8600572
Genome browser
AA seq
640 aa
AA seq
DB search
MANKLKVDELRAELAKRGLDTTGTKPSLVRRLESALEQENKQSEVDSVDGGGSSNNKRER
ESEDGGGDSNNGTEKIKAIEKFRDMNVKQLREQASLLGVSTAGTKRQLIDRLCNAEPDNH
HSLQPKEEEQEQGEKEKDKIVTATKKGAAVLDQFLSDQIKSEYHVLQIGDDVYDAMLNQT
NVGDNNNKFYVIQLLESDGGGRYMVYNRWGRVGVNGQVKLFGPYTSRDPAVSEFERKFYA
KTKNDWSKRKEFICYPKCYALLEMDYSEQEKEPVVKEKLDSAIAIQPRETQLESRIAKFI
SLICNVSMMKQQMMEIGYNANKLPLGKLSKSTILKGYDVLKRISDVIGTADMLKLEQLSG
EFYTVIPHDFGFKKMREFVIDTPQKLKCKLEMVEALGEIQVATKLLEDEPGMQEDPLYSH
YNRLRCELTPVEVDSEDFAMIAMYLQNTHAKTHSQYTVDIAQIFKVSREDENESFRKFSN
TKNRMLLWHGSRLTNWTGILSQGLRIAPPEAPVTGYMFGKGVYFADMFSKSANYCYANHA
APAGVLLLCEVALGDMAELLYANYDADKLPSGKLSTKGVGRTAPDLSDARALEDGVVVPL
GKPKEQRGSKGALLYNEYIVYNVGQIRMRYVVQVNFNYKH
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataagctcaaagtagacgagcttcgagccgaactcgctaaacgtggactcgat
accaccggaaccaagccttccctggtgcggagactggaatcggcactcgagcaagaaaac
aagcagtcagaagtggactcggtcgatggtggaggtagtagtaacaacaaaagagaaagg
gagtctgaagatggaggaggagattctaataacgggacagagaaaatcaaggctattgaa
aagtttcgggacatgaatgttaagcaattacgcgaacaggccagtctccttggagtttcc
actgccggaaccaagagacaattaattgacaggctctgcaacgctgaaccagacaatcac
cattcacttcaaccaaaagaagaagagcaggaacagggtgaaaaggaaaaggataaaatt
gtaactgctacgaaaaagggcgcggcggtgctagatcagtttctttctgatcagataaag
tcagagtatcatgttttgcaaataggtgatgatgtctatgatgccatgctgaatcagaca
aatgttggggacaacaataacaagttctatgtgattcaacttcttgaatctgatggtggt
ggtagatatatggtctataacagatggggtagggttggggtgaatggtcaagttaagcta
tttggtccctacacttcacgagatcctgctgtttctgagtttgaacggaagttctacgcc
aagacaaagaacgattggtccaagcgaaaggagttcatatgttacccaaagtgctatgct
ttgttggaaatggactacagtgagcaggaaaaggagccagttgttaaagaaaagcttgac
tctgctatagcaattcaacctcgggagacacaacttgagtcacgtattgccaaatttatc
tctcttatatgtaatgttagtatgatgaagcagcaaatgatggaaataggatacaatgca
aataaattgccacttggtaaattaagcaagtcaactatattaaagggttatgatgttttg
aagaggatttctgatgtaattggaacagcagatatgttaaaacttgaacaactaagcgga
gaattttacactgtcattcctcatgattttggatttaaaaaaatgcgagagtttgttatt
gatactcctcagaagttaaaatgcaagctggaaatggttgaagccctaggcgagattcaa
gttgcaacaaagttgttggaggatgaacctggaatgcaggaagatcccctgtattctcat
tacaaccggctacgttgtgaattgactccagttgaagttgattctgaggactttgcaatg
attgccatgtatttgcagaatacgcatgcaaaaacacattcacagtatactgttgatatt
gctcaaatattcaaggtctcaagagaggatgaaaatgaaagcttcagaaagttctctaac
acaaaaaatagaatgcttttatggcatggctcgcgcctcacaaactggactggcattcta
tcccaaggcttgcgtattgctccccctgaagcaccagtaactggttacatgtttggaaag
ggagtttactttgctgacatgttctccaaaagtgcaaattattgctatgcaaatcatgct
gctccagctggtgtgctgcttctgtgtgaggttgctcttggagacatggctgaactatta
tatgcaaactatgatgctgataagttgccatcggggaagctaagcacgaaaggagttggt
agaactgctccagatctttcagatgccagggcactggaggatggtgttgttgttcccctt
gggaagcccaaagagcagcgaggctcaaagggtgctttgctgtacaatgagtacatagtc
tacaacgtgggtcagattaggatgcgatatgtagttcaagtgaattttaattacaagcat
taa
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