Populus trichocarpa (black cottonwood): 18105577
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Entry
18105577 CDS
T01077
Name
(RefSeq) transcription factor MYB54
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18105577
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
18105577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF3871
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
18105577
NCBI-ProteinID:
XP_006374219
UniProt:
U5FPX4
C1KA89
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All DBs
Position
15:complement(2673633..2675607)
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AA seq
236 aa
AA seq
DB search
MCTRGHWRPAEDEKLKELVEKYGPHNWNAIAEKLHGRSGKSCRLRWFNQLDPRINRSPFT
EEEEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARRYRERSRLHAKRTAQAL
VNEQKFSSKQDMQINCETRSFSSFVKKYCEKFGQYPLITHSYLPAFWKEFYNDDLSNCED
QNRPIEFYDFLQVNTESNKSEVIDNARREDEEVDQQEVILEHQSKAGVPFIDFFSA
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtgtactagaggccattggaggcctgcagaagatgagaagcttaaggagttggttgag
aagtatggtcctcataattggaacgcgatcgccgaaaagcttcatggaagatcagggaag
agttgtaggttgagatggtttaatcagttggatccaagaatcaatagaagtccttttacc
gaagaggaagaagaaagacttcttgcttctcaccggatccatgggaatagatgggcagtt
attgcaaggcttttcccaggtcgcaccgataatgcagtgaagaatcattggcatgtcatc
atggcaagaagatatagagaaaggtctaggcttcatgcaaaaagaactgctcaagctttg
gtaaacgagcaaaaattctcttcaaaacaagacatgcagataaattgtgagacgaggagc
ttttcttcatttgtcaagaaatattgtgagaaattcggccaatatcctttgatcactcac
agctacttaccggccttttggaaagagttctacaatgacgatctaagtaattgtgaagat
caaaatcggcccattgagttctacgattttctccaagtaaacacggaatccaataaaagt
gaagtgatagacaatgcaagaagagaggatgaagaggtagatcagcaggaagtcatattg
gaacatcagagcaaggctggcgttccattcattgattttttctcagcttga
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