Populus trichocarpa (black cottonwood): 18105661
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Entry
18105661 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18105661
KO
K10997
replication fork protection complex subunit TIMELESS/Tof1/Swi1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18105661
03400 DNA repair and recombination proteins [BR:
pop03400
]
18105661
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Fork protection complex
18105661
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
Check point factors
FPC (fork protection complex)
18105661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIMELESS
Motif
Other DBs
NCBI-GeneID:
18105661
NCBI-ProteinID:
XP_024441925
LinkDB
All DBs
Position
15:1809732..1821134
Genome browser
AA seq
1280 aa
AA seq
DB search
MEMQGLAGICVGLGTPEEDDNGNRIGYTKGANCLDNLKDLLRFLRRDDPQTRGVFKQVCK
WNTVGKDLMPIIQYCQDDRNLVLNAVKVLVFLTMPIEPSSSDIWLQVEYLWGLKAAITLS
GTIPVVVSLLEGPLENLDREAFTEDDWKLVQLVLTLFRNVLAVHDFSMLQKVGESASQFL
SLRDRFLELLFHENVMDIILVITQNIKGSCSYFLHDNLLLLEIFHYIFMGQEPGLIVNAG
LKDFKVCGSSTSLDILKSIMKEEEQKKMKLSRQRNVVRHSQFSGTFTWLTMDGSKAVCLG
NPSSASQILLKPNKAQKGPSKKILWDHGRLPSMKDNILELLHDFLNQFLSGGYNDLMESI
REDIEKEHHAIQNSDIVVFFQVAQFVTSFQYHKYITSKPNMEKDNSQAFSDEYADNTSFK
GGICGPIAASMNESMFLLVISRWKNAFEGLKVTHDYKFLSAAGALMRIMIRMLDLVLKLL
PGDSKEPLTARILLYKLEPLTARILLYKLFYDQTDQGMTQFLLSLIKSFDTHKQTKSDLS
DLVEMIHVLVRLMENLQTRGTLRVSKKSRRSRKKKPLSDKKENGNEQCNVEATIEDPTAL
SNSEQSTVLQKKSPEIATSGDQANMNVDVLEKPEIFVPEMENLGSTLQMENKKIDIDDLS
CSSDDSSGDEQPAENYEVDFKVSTFISSLANHSIIQNLCWLLRFYKNNSVSTNHYIVCML
QRITDDLDLSPMLYQLSLLTIFYEILEEQKSCPCKEYANIVDFLTSLVRRMLRKMKNQPL
LFVEVLFWKSRKECHYINAEYMLHELGHLKKESAGWGNASANKDIGSSQGKRWAPRSIAD
ALGEDEADVVIPHELGYQNGGDAAEHESVSVPRRKRRFVLTDEMEMKIKDLYEKFKDDEN
CSHLIAESLDPDGQVSRAQVINKLKQLGLKVASKKRKRSVGRPFSTNPDQLGENGEIIEK
ESNLHNSIDLEGSLPRLSTRKRVRAFNKDQEEMIKALFEQFKDHRRCSYMIANAMGSDNS
FTAAQVSRKLKQLGLRAPRQKQSETDMHLRDEELNSFSVGGQDSDDETLLSLKNRSKNKD
DGGLFGDELPSQNIEGESSDSDDELLCSILKPKNNAGDRLVAGKQNNEGEISDNSDKEIL
SSKMNKTKKLLSKAKGKELRTSSSESEMPDEDAGNEALNDLERRDRGSESTGQDVVGVDE
DTVLDHGSKEGASEAEATNSRSGKSTGVSPVNYVDDIPDQQMDDALEDLEDAAASDTVVT
SARLKRKLRMVVDLEDEDDD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcaaggtttagctggtatctgcgtcggtctaggcacccctgaagaagacgac
aacggaaatcgaattggttacactaaaggcgctaactgcttagataatttaaaagatttg
ttgagattcttaaggcgcgatgatccacaaacgcgaggagtatttaagcaagtgtgtaaa
tggaatactgtggggaaagatttaatgccgattattcagtattgtcaagatgatcgtaat
ttggtcttaaatgcagttaaggttctagtttttcttactatgccaattgagccgtcttcg
agtgatatatggctacaagtagagtatttatggggtttgaaggctgcaattacgcttagt
ggtacgattccagtggttgtttcgcttcttgaaggcccattggagaatttggaccgtgag
gcgtttactgaggatgactggaaattggttcagttggtgctgacattgtttagaaacgtt
ctagcagttcatgatttttcaatgttgcagaaagttggggaatcagcaagtcagtttttg
tctctaagggataggtttttggagcttttgttccatgagaatgtaatggacatcattcta
gttataactcagaatataaagggttcatgcagttattttcttcatgataacttgctttta
ttagaaattttccattacattttcatgggtcaagagccagggttgattgttaatgccggt
ctaaaggatttcaaggtttgtggaagcagcacttctcttgacatcctcaagtccattatg
aaagaagaagaacaaaaaaaaatgaagctttctagacaacgaaacgtggtccgtcattca
caatttagtggaacctttacctggcttaccatggatggttctaaagcagtatgcttagga
aaccctagttctgcttctcagattctacttaaacctaataaagctcaaaagggtcccagt
aaaaagattttgtgggaccatgggagattaccttcaatgaaggataatattttggagtta
ctgcatgattttctgaaccagtttctatcagggggttacaatgatttgatggagtcgatc
cgtgaagatatcgagaaggagcatcatgcaattcaaaacagtgacattgttgttttcttt
caggttgctcagtttgttacttcttttcaatatcacaagtatattacttccaagccaaat
atggaaaaagacaattctcaagccttctctgatgagtatgctgataacacatcattcaaa
ggaggtatatgtggacccattgcagcatcaatgaacgaatcaatgtttctactagtcatt
tcaagatggaaaaatgcttttgaaggcttgaaggtgacacatgattataagtttctgtct
gcagctggtgctcttatgagaattatgattcgcatgttagatttggtgcttaagttactg
ccaggagattctaaggagcctttaacagctcgcatcctgctttacaagttggagccttta
acagctcgcatcctgctttacaagttgttctatgatcagactgatcaaggaatgactcag
ttcctcctgagcctgatcaaatcatttgacacacacaagcaaaccaaaagtgatctttca
gatctggtagaaatgattcatgtacttgtaaggctgatggagaatcttcaaacacgtggt
accttgagagtttctaagaagtcgaggagaagtagaaagaagaaaccattgagtgacaag
aaggaaaatggaaatgaacagtgtaatgttgaagccactattgaggatcccactgctctg
tctaatagtgaacaatcaactgttttgcaaaagaaaagcccagaaattgcaacttctggt
gaccaagcaaacatgaatgttgatgttcttgaaaagcctgaaatatttgtaccagagatg
gagaatcttggcagcactttgcagatggagaataaaaagattgatattgatgatctttct
tgcagttctgatgattcttcaggcgatgagcaacctgctgaaaattatgaagttgatttt
aaagtctctacttttatatcatctttggcaaaccacagcattattcagaatttgtgctgg
ttacttaggttctataagaacaattctgtcagcacaaatcactacatagtatgcatgttg
cagagaatcactgatgatttagatctctctccaatgctatatcagttatcgctgctcacg
atattctatgagattctggaagagcaaaagtcatgtccatgcaaggaatatgcaaatatt
gttgatttccttacgagtttggttagaagaatgctaagaaaaatgaagaatcagcccctt
ctttttgtagaagttctcttttggaaatcccggaaagaatgccattacattaatgctgaa
tatatgttgcacgagcttggtcatttgaagaaagaaagtgcaggctggggaaatgcttca
gcaaacaaagatattgggtcatcacaggggaagagatgggctcctagaagcatagcagat
gcactgggtgaggatgaagcagatgttgtgatccctcatgaactgggatatcagaatgga
ggagatgctgcagaacatgaaagtgtaagtgttcctaggaggaagagaagatttgttctg
acagacgagatggagatgaaaataaaagatctgtatgagaaattcaaagatgatgagaat
tgcagtcatttgattgcggaatccttagatcctgatggtcaagtttcacgagcacaagtt
atcaacaagctcaagcagctaggattgaaagttgcatcgaagaaaaggaagcgctctgtt
ggtagaccattttctactaatcctgatcaacttggtgagaatggagagataattgaaaag
gaaagcaatcttcacaattcaattgatttagaaggaagtttgccaaggctgagcactagg
aaaagagtgagggccttcaacaaagatcaggaggaaatgattaaagcgttatttgagcag
ttcaaagaccatcgaagatgcagctatatgattgcaaatgcaatgggatctgataattca
ttcacagctgcccaagtgtccagaaaactcaagcaacttggtttacgtgctcctcggcag
aagcagtctgagacagatatgcatctcagagacgaggaactgaatagcttttctgttgga
ggacaagattctgatgatgaaacattgttatcgttaaaaaataggagtaaaaacaaggat
gatggtggattatttggtgatgagttgccaagccagaacattgaaggagaatctagtgat
tctgatgatgaactcctatgctctattctcaagcctaaaaacaatgctggtgatagattg
gttgctgggaaacagaataacgaaggagagatttctgacaattctgataaagaaatcttg
agctctaaaatgaataaaaccaagaagctcctttcgaaggcaaaaggtaaagagctcaga
acttcttcatctgagagtgaaatgcctgatgaagatgccgggaatgaagctcttaacgat
ctagaacgaagggacagaggcagcgagtccactgggcaggatgttgtaggggttgatgag
gatactgttcttgaccatggcagcaaggaaggtgcttcagaagctgaagcaactaacagc
agaagtggaaaatcaacaggggtttcaccagtcaattatgtagatgatataccagatcaa
caaatggatgatgcattggaagatttggaggatgctgcagcttctgatacagtagtgaca
agtgccagacttaaaaggaagttgaggatggtagttgatctcgaggatgaagatgatgat
taa
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