KEGG   Populus trichocarpa (black cottonwood): 18105741
Entry
18105741          CDS       T01077                                 
Name
(RefSeq) glycine-rich RNA-binding protein 3, mitochondrial
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18105741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pop03019]
    18105741
   03041 Spliceosome [BR:pop03041]
    18105741
Messenger RNA biogenesis [BR:pop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     18105741
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     18105741
Spliceosome [BR:pop03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    18105741
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_MARF1
Other DBs
NCBI-GeneID: 18105741
NCBI-ProteinID: XP_006374399
UniProt: A9PIG6
LinkDB
Position
15:7976005..7978127
AA seq 241 aa
MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAF
DKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATERP
QRTFNNNYGNYGGGGYGGGGGGYGGGGGGYGTGGGYGSNYAGQSTYDGGAGNYGAAAGGG
RSDGYTNTSVDGGYDGNAGLGYGGGNQFGANESSGDGLNLDDALDKNSKEDDDAGDFAKR
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atggcgtttcttactaaattgggaaatatgttacggcagactgctaataggcagatcact
tctgagatctctgcatcaagaccatccatctatcaagcattaagatgcatgtcatcctca
aaaattttcattggaggtatttctttccagacagatgacaacggtctgaaagaggccttt
gataaatatggcaatgttgttgaagcaagaatcattatggatcgtgatactggcagatct
agaggatttggattcgttacttacacctccagtgaggaggcctctagtgccatccaggcc
atggatggacaggatcttcatggtcgccgtgttagggtgaattatgcaactgaaaggcct
cagcgtacctttaacaataattatggcaactatggtggtggaggatacggcggcggcggt
ggaggatacggcggcggcggtggaggatacggcactggtggaggatatggctctaattat
gctggtcaaagcacttatgacggtggtgctgggaattatggtgctgctgctggtggtggc
agaagcgatggctataccaacaccagtgttgatggtggatatgatggaaatgctggattg
ggttatggtggcggcaatcagtttggtgccaatgagagtagtggtgatggtttgaaccta
gatgatgcgttggacaaaaactccaaggaagatgatgatgctggtgattttgccaaaagg
gtatga

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