Populus trichocarpa (black cottonwood): 18105799
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Entry
18105799 CDS
T01077
Name
(RefSeq) RINT1-like protein MAG2 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18105799
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
18105799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
18105799
NCBI-ProteinID:
XP_006374474
UniProt:
B9N4B5
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All DBs
Position
15:complement(8809702..8814589)
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AA seq
804 aa
AA seq
DB search
MDASIQITLPPVSSLSSSTLSFLNSEQDLSRARSYIDELQSQCFDLDRTLIDLNSRLHST
LLSYASFSDGIHLLFDDATSKLTDLRSFTCPPPLSSSLSPSDGQGRREEILGEELPALAK
EVARVETVRVYAETALKLDTLVGDIEDAVSSAMNKKLRKYSSTQSVEEMRLLAIERLGHS
EDVLISVTETHPQWTSLVSAVDHRIDRALATLRPQAIADHRSLLGSLGWPPPLSTLTSSN
LDAGKSAEVSNPLFTMQGLLKQQYCENFLALCHLQELQWRRKSRQLEGHNRKVALQQPLW
AIEELVNPISIACQRHFSKWIDKPEFVFALVYKITRDYVDTMDELLQPLVDEARLAGYSC
REEWISAMVTSLVTYLAKEIFPKYVAELDGESVSGVQSKARFSWLHLVDLMIAFDKQIQS
LVTHSGISLSLQDDGNLQKISSLSVFCDRPDWLDIWAEIELNDTLEKLKPEVDDERNWTA
KIEGALLSGFESYKSPAVSSAFVRRLLLVVDRCRSLPNAFLRSRFLKMAGGSITQRYLDC
LLLRCQEAEGLTALTDDNGLIKVANSVNAAHYFESVLKERCEDTFFLELGFDHREQLGIG
INDNSGLEGRIDGPVGCVFDEEIKKLENFRKEWVERISVAVLRGFDARCREYIKNRRQWQ
EKGEESWTISKTLVGALDYLQGKMAVAEENLNRIDFVGAWRSLAAGVDHLLFNGLFTSMV
KFHDAGVERFNGDMEILFGVFRAWCLRPEAFFPKTSDGLKLLTMSEEQLRDTIAGGGKRM
KENGIIHLNVAEAEKIQNKRVFMR
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatcaatccaaattactctgccaccagtatcgtctctctcctcctcaactctt
tcttttctcaacagtgaacaagatctcagccgagcacgaagctatatcgacgagcttcaa
tctcagtgtttcgatttagaccgaaccctaatcgacctcaattccagactccattccact
ctcctctcttacgcttccttctccgatggaattcatctccttttcgatgatgccacttcc
aagttgaccgatctacgttccttcacttgccccccaccgctttcttcttctctatcacca
tcagatggacaaggaaggagggaggagatattgggcgaggaactaccagcgctggccaag
gaggtggctcgagtcgaaacggttcgggtctacgcggagacggcattgaaacttgataca
ttggttggtgatattgaggatgcggtatcttctgcaatgaacaaaaaactaaggaagtat
tcttccacacagagtgtagaagaaatgcgcctgcttgctattgaaagactcggacattca
gaagatgttttaatttctgttacagagacacaccctcagtggacaagtcttgtatcagca
gttgaccacagaatagatagggctcttgccacattaagaccccaggcaattgcagatcat
cgatcacttcttggatccctaggatggccacctccactttccactttgacgtcctcaaac
cttgatgctggaaaatcagctgaagtctccaatcctcttttcacaatgcaagggcttctt
aaacaacagtactgtgaaaactttcttgctttgtgtcacttgcaggagctgcagtggcgg
agaaaatcacggcaacttgagggtcacaacaggaaagtggctctgcagcaaccactttgg
gcaatcgaagaacttgtgaatcctatttcaattgcatgccaaagacatttttcaaagtgg
attgataagccagaattcgtttttgctcttgtctataagattaccagggattatgtcgac
actatggatgaattattgcaaccactggttgatgaagcaaggttagcgggttacagttgc
agagaagaatggatttcagcaatggtaacctctttagtaacatacttggcaaaagaaata
ttccccaagtatgttgctgaactggatggggagagcgttagtggtgtacaatcaaaggct
agattttcttggcttcatcttgttgatcttatgattgcttttgataaacagattcagtct
ctggtaacgcattctggaatttcgctttcccttcaggacgatggcaacctgcagaagatt
tcttctctatcagtcttctgtgatcgacctgactggcttgatatatgggcagaaattgaa
cttaatgacacacttgagaagctaaaacctgaggttgatgatgagagaaactggacagca
aaaattgaaggtgctcttttatctggttttgaaagttacaaatctcctgcagtttcaagt
gcctttgttcggcgacttttgttggttgttgatcgatgccgatcactgcctaacgccttt
ttgaggtcaaggtttctgaaaatggctggtgggtctattacgcaacgatatttggattgt
ttgctactcaggtgccaggaagctgaaggactgactgcattaacagatgacaatggattg
atcaaagttgcaaactctgttaatgctgctcactactttgaatctgttttgaaggaacgg
tgtgaggacaccttttttcttgaattgggatttgatcacagagagcaactgggaataggg
attaatgataatagtggtttggaggggcgaattgatggacctgttggttgtgtttttgac
gaggagataaaaaagttggaaaattttagaaaagagtgggttgaaaggatatcagttgct
gttttgaggggatttgatgctaggtgtcgagaatatataaaaaacaggaggcagtggcaa
gaaaagggtgaagaaagttggacaatctccaaaactttagtcggggctctagattatttg
caaggaaagatggcagtagcggaagaaaatttgaaccggatagattttgttggtgcctgg
cgaagtttggcagcgggggttgaccacttgctttttaatggcctttttacgagcatggtg
aagtttcatgatgctggtgttgaaaggtttaatggtgatatggagattttgttcggagta
tttagagcttggtgcttgaggcctgaagccttctttcctaaaaccagtgatggcttgaag
ttgttaacaatgagcgaggagcagctccgagatactatcgcaggaggagggaaaagaatg
aaggagaacggcattatccatttgaatgtagcagaggcagagaagatacaaaacaaaaga
gtatttatgagataa
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