KEGG   Populus trichocarpa (black cottonwood): 18105801
Entry
18105801          CDS       T01077                                 
Name
(RefSeq) transcription factor PRE6
  KO
K28364  atypical basic helix-loop-helix transcription factor protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    18105801
Transcription factors [BR:pop03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    18105801
SSDB
Motif
Pfam: bHLH_ILI HLH CENP-F_leu_zip Spc24 SYCE1 DUF948 Seryl_tRNA_N PUMA_CC bHLH_IRO3 DUF5798 Rab11-FIP3 CHIP_TPR_N Dynein_C MJ1674_2nd CLZ PRC2_HTH_1 FlxA
Other DBs
NCBI-GeneID: 18105801
NCBI-ProteinID: XP_006374476
UniProt: B9N4B3
LinkDB
Position
15:complement(8863112..8864665)
AA seq 91 aa
MSSRKSRSRQSGSSRINDDQILDLVTKLQQLLPETRNRRSEKVSAAKALQETCNYIKSLH
REVDDLSERLSELLETTDTTQAAIIRNLLMQ
NT seq 276 nt   +upstreamnt  +downstreamnt
atgtctagccggaagtcgcgatcaaggcaatcaggtagttcaagaatcaatgatgatcag
atccttgatcttgttacaaagttgcaacaacttcttcccgagactcgaaatcggcgttct
gaaaaggtctcagctgccaaggccttgcaggagacatgcaactatattaaaagcttgcac
agagaggttgatgatcttagcgagcggctttctgagctattagagacaactgacactact
caagctgcgataattaggaatttgcttatgcaatag

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