Populus trichocarpa (black cottonwood): 18105801
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Entry
18105801 CDS
T01077
Name
(RefSeq) transcription factor PRE6
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18105801
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
18105801
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Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
CENP-F_leu_zip
Spc24
SYCE1
DUF948
Seryl_tRNA_N
PUMA_CC
bHLH_IRO3
DUF5798
Rab11-FIP3
CHIP_TPR_N
Dynein_C
MJ1674_2nd
CLZ
PRC2_HTH_1
FlxA
Motif
Other DBs
NCBI-GeneID:
18105801
NCBI-ProteinID:
XP_006374476
UniProt:
B9N4B3
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All DBs
Position
15:complement(8863112..8864665)
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AA seq
91 aa
AA seq
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MSSRKSRSRQSGSSRINDDQILDLVTKLQQLLPETRNRRSEKVSAAKALQETCNYIKSLH
REVDDLSERLSELLETTDTTQAAIIRNLLMQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccggaagtcgcgatcaaggcaatcaggtagttcaagaatcaatgatgatcag
atccttgatcttgttacaaagttgcaacaacttcttcccgagactcgaaatcggcgttct
gaaaaggtctcagctgccaaggccttgcaggagacatgcaactatattaaaagcttgcac
agagaggttgatgatcttagcgagcggctttctgagctattagagacaactgacactact
caagctgcgataattaggaatttgcttatgcaatag
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