KEGG   Populus trichocarpa (black cottonwood): 18105959
Entry
18105959          CDS       T01077                                 
Name
(RefSeq) squalene monooxygenase SE1
  KO
K00511  squalene monooxygenase [EC:1.14.14.17]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop00100  Steroid biosynthesis
pop00909  Sesquiterpenoid and triterpenoid biosynthesis
pop01100  Metabolic pathways
pop01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:pop00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    18105959
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    18105959
Enzymes [BR:pop01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.14  With reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen into the other donor
    1.14.14.17  squalene monooxygenase
     18105959
SSDB
Motif
Pfam: SE FAD_binding_3 DAO GIDA NAD_binding_8 FAD_binding_2 Thi4 Pyr_redox_2 FAD_oxidored ApbA Lycopene_cycl HI0933_like Pyr_redox NAD_Gly3P_dh_N TrkA_N Sacchrp_dh_NADP
Other DBs
NCBI-GeneID: 18105959
NCBI-ProteinID: XP_024442381
LinkDB
Position
15:complement(13487711..13490451)
AA seq 531 aa
MFSDQSLVMEYQYLLGGVIASVFVWGLLLAFHAKGRKKVRVSMDIPRDSTLKSSENGMSW
ARNPESTDIIIVGAGVAGSALAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLIE
LGLEDCVSDIDAQRVLGYAIFKDGKSTKLSYPLENFPSDVAGRSFHHGRFIQKMREKAAT
LSNVKLEQGTVTSLLKENGTIKGVQYKTRVGQELTAYAPLTIVCDGCFSNLRQSLCNPKV
EIPSCFVGLVLENCNLPYANHGHVVLADPSPILFYPIRDTEIRCLVDVPGQKVPSVSNGE
MSHYLKNTIAPQIPPELHDAFISAIDKGGMRTMTNRSMPASPYPTPGALLMGDAFNMRHP
LTGGGMTVALSDIVLVRDLLRPLNNLNDASSLCNYLESFYTLRKPVASTINTLAGALYKV
FSASPDPARNEMRQACFEYLSLGGVFSKGPIALLSGLDPRPLSLVLHFFAVAIYGVSRLM
LPLPSPKRLWTSARLISGASGIIFPIIKGEGVRQMFFPVMVPAYHRSPPMA
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgttttctgatcagtctctagtaatggaatatcagtatctattgggaggagtcattgct
tctgtttttgtttgggggttacttttagcttttcatgcaaaaggaaggaaaaaggttaga
gtttcaatggatattccaagggacagtactttgaaaagctctgaaaatggaatgagctgg
gcacgcaatcctgaaagcacagatataatcattgttggtgctggtgttgccggttcagct
cttgcttacactcttggaaaggatggtcgcagagtacacgtaattgaaagagacttgaca
gagcctgacagaattgttggagaactcctacaacctggaggttacctgaaattaattgaa
ttgggccttgaagactgtgtgagtgacattgatgctcaaagagtgcttggatatgcgatc
ttcaaagatgggaaaagtaccaaactatcatatcccttagagaactttccttcagatgtt
gctggaagaagctttcatcatggccgttttattcagaaaatgcgagagaaagctgcaact
ctttccaatgtcaaactggaacaaggaactgtaacatctctgctgaaagaaaacggaact
atcaaaggagttcagtacaaaaccagggtaggtcaagagttgacagcatatgctccatta
acaatagtctgcgatggctgtttttcaaatctgcggcagtccctttgcaatcccaaggtt
gaaatcccatcctgttttgttggtttggtgctggagaactgcaaccttccatatgcaaat
catggacatgttgttctagctgacccatctccaatcttgttttatcctattagggataca
gagattcgctgtttggtagatgttcctggacagaaagtaccttctgtttctaatggcgag
atgtctcactatctgaaaaatacaatagctcctcagattcctcctgagctgcatgatgct
ttcatttctgcaattgacaaagggggcatgagaacaatgacaaacagaagcatgccagct
tctccttaccctactccaggtgcacttttaatgggagatgcattcaacatgaggcatccc
ttaactggaggaggaatgactgtggctctatcagacattgtgctagtacgtgaccttctt
cgacctctgaacaatctcaatgatgcgtcttccctttgcaattatctcgagtccttctac
acactgcgtaagcctgtggcatctaccattaacacattggcaggtgccctgtacaaggtg
tttagcgcatcacctgatccagctagaaacgaaatgcgccaagcatgtttcgaatacttg
agccttggaggagtattttcgaaagggccaatagctctactttctggtctagaccctcgg
ccgttgagcttggttctccatttctttgcagtggctatctatggagtcagccgcttaatg
cttcccttaccatctcctaaacggctgtggaccagtgctagattgatttcgggggcatca
ggaatcatctttcctataataaagggggaaggggttagacaaatgttcttccctgtaatg
gtaccagcataccacagatctcctccaatggcttga

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