Populus trichocarpa (black cottonwood): 18105982
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Entry
18105982 CDS
T01077
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
18105982
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
18105982
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
18105982
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
18105982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
18105982
NCBI-ProteinID:
XP_024443388
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Position
16:complement(85809..90376)
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AA seq
659 aa
AA seq
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MNAVSFSHTSTTKVFSGILTTMRMRNLVIGLLFLTVLSPFFYTDKLSSSFTPSTSKQEDV
NAFTLPTDTRHLNVLPQEESSTVIKEPIGIVYTDHINSSSNTILTEKDSQLPDAREHKYA
RVLSATDDEGHSQTDNIIKQIIQTTNQEEEESQSDNGSDQESKQKTQVQLEQQSAVNSGD
DDEKDALLTETNKQTDQTAMPDARVRQLRDQLIKARVYLSLPATKNNPHFTRELRMRVKE
VQRVLVDATKDSDLPKNAYAKLNAMDQLLEKGKQMQDDCATMVKKLRAMLHSTEEQLRVH
KKQTMFLTQLTAKTLPKGLHCLPLRLTTEYYNLNSTEQQFPNQEKLDDPSLHHIALFSDN
VLAAAVVVNSTITNSKHPSKLVFHIVSDRLNYAAMRMWFLVNPPGVATIQVQNIEEFTWL
NSSYSPVLKQLGSRSMIDYYFRAARASSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKV
LFLDDDIVVQKDLTGLWSLDLKGNVNGAVETCGENFHRFDRYLNFSNPHISKNFDPRACG
WAYGMNIFDLKEWKRQNITDVYHTWQKLNHDRQLWKLGTLPPGLITFWKRTHPLDRRWHV
LGLGYNPNVSQREIERAAVIHYNGNMKPWLEIGIPKYRSNWAKYVDYDHAYLRECNINP
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagtttctttctctcatacatccacaacaaaagtcttttctgggattctcacc
acgatgaggatgagaaatctggtgattgggttgctcttcctcactgtcttgtctccattc
ttttatactgataaattatcctcctcctttaccccttctacttctaaacaagaagatgtt
aatgcttttactctccctactgataccagacatctcaatgtgttgccccaggaggaatca
tctaccgtgattaaagaacccattgggattgtgtatactgatcacatcaactcctcctcc
aataccattctgactgaaaaagattcgcagttgcctgatgcaagagaacataaatatgct
agagtactatctgccactgatgacgaaggtcattctcaaaccgacaatatcatcaaacag
atcattcagaccactaatcaggaagaggaggaatcccagtcagacaacggaagtgatcag
gaaagcaaacagaaaactcaagttcagcttgaacaacaatctgctgtaaactcgggcgac
gatgatgagaaggatgctctgttaactgaaaccaataaacagacagatcaaacagctatg
ccagatgctcgggtgcggcagctcagagatcagcttatcaaggcaagggtgtacctgtcc
cttccggcaacgaagaacaatccccactttacaagggagcttcgaatgcgggtaaaggaa
gttcagcgtgtacttgtagatgcaactaaggattctgatctgccaaagaatgcctatgcg
aaattgaatgcaatggaccaattgctggaaaagggcaagcaaatgcaggatgactgtgct
actatggtaaagaagctccgggcaatgctccactcaacagaagagcaactccgagtccat
aagaagcagaccatgttcttgacgcaattaactgcaaagacgctacctaaaggtttgcac
tgtcttccgttgcgcctgacaacggagtattataatttgaattctactgaacagcaattt
ccaaatcaagagaaattggatgacccttcacttcaccatattgcactattctcggataat
gttttggcagcagcagtggttgtgaactccaccattaccaattctaagcatccttcgaag
cttgttttccacattgttagtgatagactcaactatgcagcaatgaggatgtggtttcta
gtaaatccacccggtgtagccactattcaggtccagaacattgaagaattcacatggtta
aattcaagttatagtcctgttctgaagcagttgggttctcgatcaatgattgattattac
ttcagggcagctcgtgccagttctgattcgaatttgaagtaccggaacccaaagtacctg
tccatcctgaaccatcttcgcttttacctgccagagattttcccaaagctcaacaaggtg
ttattcttagatgatgatatagtggtgcagaaggatcttactggcctttggtcccttgat
ttgaagggtaatgtgaatggtgctgtagagacctgtggagaaaacttccatcgttttgat
cgatatctcaacttctcaaatcctcatatctcaaagaattttgatccccgtgcttgtgga
tgggcatatggaatgaacatctttgatttgaaggaatggaagaggcaaaacatcactgat
gtatatcatacatggcagaagctgaatcatgacagacaattatggaagttggggactctg
ccacctggcctcattactttttggaaacggactcacccccttgaccgacgttggcatgtt
ctgggccttggctataatcccaatgtgagccaaagagaaattgaacgagcagctgttata
cattacaatggcaacatgaaaccatggcttgaaataggcatacccaagtatcgaagcaac
tgggcaaaatatgttgattatgatcatgcatatttgcgagagtgcaatatcaatccataa
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