Populus trichocarpa (black cottonwood): 18105993
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Entry
18105993 CDS
T01077
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
18105993
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18105993
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18105993
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GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
18105993
NCBI-ProteinID:
XP_052303822
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Position
16:complement(156014..158823)
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AA seq
402 aa
AA seq
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MGCIHSRNQGHHHDPYCCRASSKYPSTSLYSARHAAYDDGRSKLQSRYSRNGDDYHSLEQ
VTKALVQAGLESSNLIVGIDFTKSNEWTGSRSFHHKSLHHLGDSLNPYEQAISIIGRTLS
DFDEDNRIPCFGFGDDTTRDKKVFSFYPDDQVCHGFEEVRSRYRELVPHVHLAGPTSFAP
IIETAIEIVDNSGGQYHILLIIADGQVTRSVDTANGQLSPQEQNTTDAIVKASNYPLSIV
LVGVGDGPWDMMHQFDDNIPCRAFDNFQFVNFTEIMSKHIPVSKKETEFALNALMEMPSQ
YKATIDLQLLGFQRGTPVRNIALPPPPGNSSVNSCPKYSSNNAYAPSADHSSDNRRQCPL
CLCNKKDLAFGCGHQTCYDCGKYLMRCPICRAYITTRIKLYE
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcatacattcaaggaatcagggtcatcatcatgatccttattgttgtagggct
tcatcaaaatatccaagcacttctctatattcagcaaggcatgctgcttatgatgatgga
agaagcaagctgcagtcaaggtattcaagaaatggtgacgattaccattctcttgagcag
gttacgaaagctcttgtgcaagctggtctggaatcttccaaccttattgtaggcattgat
tttaccaaaagcaatgagtggaccggctcgcggtctttccatcataagagcctgcatcac
cttggggattctctgaatccgtatgaacaggcaatttcaataataggaagaacgttgtca
gattttgatgaggataaccgcatcccttgttttggctttggtgatgacacaactcgtgat
aaaaaagtctttagcttctatccagatgatcaagtatgccatggctttgaggaagtccgg
agtcgttacagagaattagtcccccatgttcacttagctggaccaacatcttttgctcca
atcattgaaactgctattgaaattgtggacaatagtggtggtcagtatcatattcttctg
atcattgctgatggacaggttacaagaagtgtagacactgctaatggacagttaagtcct
caggagcagaatactactgatgccattgtaaaagcaagtaattatcccttgtcaattgtg
ctggttggagttggtgatggaccatgggacatgatgcatcaattcgatgacaacattcct
tgtcgggctttcgataattttcagtttgtgaatttcacagaaattatgtcgaagcacatt
cccgtgtcgaagaaggagacagagtttgctctgaatgctttaatggaaatgccatcccaa
tataaagccacaatagacctccaactcttaggcttccaaagaggtactcctgtaaggaat
attgctcttcctcctccacctggaaacagctcggttaattcctgtcccaaatatagcagc
aataatgcttatgccccgtctgcagatcattcttcagacaacaggcggcaatgtcccttg
tgtttatgcaataagaaagatcttgcattcggctgcggacatcagacatgctatgattgt
gggaaatacttgatgcgatgccccatttgtcgagcctatataaccacaaggataaaattg
tacgagtaa
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