Populus trichocarpa (black cottonwood): 18106102
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Entry
18106102 CDS
T01077
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
18106102
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
18106102
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Med26
Diphtheria_C
Motif
Other DBs
NCBI-GeneID:
18106102
NCBI-ProteinID:
XP_006373696
UniProt:
U5FJY3
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Position
16:complement(1849844..1851255)
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AA seq
333 aa
AA seq
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MEKQFLSLFESAKKSAAIVATSASIFPEVYRCLDALDQLKRFPVTSSRVLVSTPVAKEVQ
YLTKHRVKMIRTAASCLLDAWSRNLYARNPAIDGKTQPTKSTSGSRPGTLIVKIQGRVIG
RVKVNMPIQTEKKIKEEKENGSSCFKKPPQDPAMHCTKPGKVQSIRRCFKKPSTKRITQQ
ENVKDFCSFKKPSEEPVKCSDGLRSKVRHILVESLCRVAKEVKEDLMEAVRLRDPIIVAA
DVESLMFERMGLFNGTKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAEEMAS
NQRQFENDQIRKKSLWKEMNAEQQHKSVDPMEY
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacagtttctgtcgctgtttgagtcagcaaagaaatctgcagccattgtggcc
acttctgcttcaatatttcctgaagtttatcgatgcctagatgctttggaccagcttaag
aggttccccgtaacatcatccagggttcttgtctccactcctgttgcaaaagaagttcaa
tatctcacaaaacaccgtgtaaagatgatcagaactgctgcttcttgcttgctggatgct
tggagtaggaatctgtacgcaagaaaccccgccattgatggtaagactcagccaacaaaa
tctacaagtgggtcaagaccggggacccttattgtcaagatacaaggaagagtaatagga
agggttaaagttaacatgcctattcagacagagaagaagataaaagaagagaaagaaaat
ggttctagttgtttcaagaaaccaccacaagatcctgccatgcactgcacaaagccaggg
aaagtacaaagtatcaggcgctgtttcaagaaaccatctaccaagcgcatcacacagcaa
gagaatgtgaaagatttctgtagtttcaagaaaccatccgaagaacctgtcaagtgcagt
gatggcttgcgtagcaaggtcaggcacattcttgtggagtccttgtgcagagttgcaaag
gaggttaaagaggatttgatggaagcagtaagattgcgtgacccaattattgttgctgct
gatgttgaatcactgatgtttgaaaggatggggcttttcaatggcaccaaacaattgaag
tacaggtcaatattgttcaacatgaaggatccaaagaatccagatttgagaaggaaagtt
cttcttggacagattaagccagagaaactcgtcactatgacagcagaagagatggcaagc
aatcaaaggcaattcgagaatgatcaaatcaggaagaaatctttgtggaaggagatgaat
gcagagcaacagcacaaatcagtggatccaatggaatattga
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