Populus trichocarpa (black cottonwood): 18106369
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Entry
18106369 CDS
T01077
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC18106369
KO
K16572
gamma-tubulin complex component 5
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pop03036
]
18106369
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
18106369
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
18106369
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
18106369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
18106369
NCBI-ProteinID:
XP_052303808
LinkDB
All DBs
Position
16:complement(1640..8480)
Genome browser
AA seq
994 aa
AA seq
DB search
MFAPQTQREETFRNLGEGIHYATPIIPLTRKTSEVDLVRGVVQMMQGLSSSLFYWDQSGQ
CFCVANVGIYVTHLSHSTLHNLLSRFTYAATCLQLVHLRLNLPHSYYALPTLRAFASVAS
HCLLRMRDVALKEEMKMCHSNEQEDFGNEFTPTLLGLSSSLSSLCSAAEYLFQIVHGAIP
QVCFEPNSSVPPVEIAVHILDYLYTKLDQVCLVQGGEVEEYLMLLNMFVGSIVPYIEGLD
SWLFEGTLDDPFEEMFFYANRAISVDKSEFWEKSYQLRRLQCRKLDINSSIPLSNNKTGM
GEKDSIPFSEFKKGKELNVKELLVCPLFIKEISKSIVSAGKSLQLIRHVPISFSMMFEKR
RHTDINVFGGSSDDSGLSICRQTFAGLTLSEIFCVSVAGLIGHGDHIFRYFLQNEQSKSK
SAAPLVSAIIRKEENKDDEGLHKFLINTLLQRKVIDLECAHNFGIDFSDLEEERMKTGAV
DEFPLQGTFFPENPAITACQSLLDKNRDSWKMLNLSKNFYLPPLNDEVLRHAIFGGENGP
VSAVKGTDYAFGFQFGVSDYDDSQNDTKLLEVLFPFPTVLPSFQDDKRMSELLPFPKNST
LISRVLSWFQSVEPRTTPLPVAIIQECLTFYIKKQVDYIGGLILSKLMNEWRLMDELAVL
RAIYLLGSGDLLQHFLTVIFGKLDKGETWDDDFELNTILQESIRNSADGTLLSAPDSLVV
SITKNHGFDSDELPNTPTLSSTPRKSRLHNFGIDGLDSLKFTYKVSWPLELIANTESIKK
YNQVMGFLLKVKRAKFALDKARRWMWKGRGNATNSRKHHWLVEQKLLHFVDAFHQYVMDR
VYHSAWRELCEGMAVAGSLDEVIEVHEAYLLSIQRQCFVVPDKLWALIASRINSILGLAL
DFYSIQQTLSSSGAASAMKARCEMEVERIEKQFDDCIAFLLRVLSLKLNVGNFPHLADLV
TRINYNHFYMSDNGNLMTATGSEIVTSRLGKTFG
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccccacaaacccaaagagaagaaacatttcgaaatctgggtgaaggcatacat
tatgcgactccaatcatccccttgacgaggaagacaagcgaagtggatctggtacggggt
gttgttcaaatgatgcaaggtctgtccagttcccttttctactgggaccaaagtgggcag
tgtttttgtgttgccaatgttgggatttatgtcactcacctttcccactcaacccttcac
aaccttctatctcgcttcacctacgctgccacttgcttgcaactcgtccatcttcgtctc
aatcttccacactcttattatgctcttcccactttgagggcatttgcgtctgtcgcttct
cactgccttctgaggatgagagatgttgctttgaaggaagaaatgaagatgtgccattct
aacgaacaagaagattttggaaacgaatttactcctactttattgggattgtctagttct
ttatcaagtctctgctcagctgctgaatatttatttcaaattgtccatggagccatcccc
caagtgtgttttgagcctaattcatctgttccacctgttgaaattgctgttcatatcctt
gactatctttacacgaaactggatcaagtttgtctcgtgcaaggtggtgaggtggaagag
tatctcatgctactcaatatgtttgtggggagtatagtaccctatattgaaggtcttgat
tcatggcttttcgaaggaacacttgacgatccttttgaagagatgttcttttatgcaaac
agggcaatctcggttgataagtccgagttctgggagaagagctatcagttgagacgatta
cagtgcaggaagttagatattaattcttccatacctttatcaaataacaagacaggaatg
ggtgaaaaagattctattcctttttctgagttcaaaaaaggaaaagagcttaacgtaaag
gaacttctagtgtgtcctttgtttattaaggaaatttctaagtcaattgtctctgctgga
aaatcattgcagctgatccgccatgttcctatttcattctcaatgatgtttgaaaaaagg
agacatacagatattaatgtttttggaggttctagtgatgacagtggtttaagcatttgc
cgacagacctttgcagggttaaccttgtcggagattttttgtgtatcagtagcaggtctt
ataggccacggtgatcatattttcagatacttcttgcaaaatgagcaaagtaaatcaaag
agcgccgctcctttggtgtctgccataattagaaaggaggagaacaaagatgatgaaggc
ttgcacaagttcttgattaatacattactgcagagaaaggtgattgatttagaatgtgca
cacaattttgggattgatttttctgatttggaggaagagcgcatgaaaactggtgctgtg
gatgaatttcccctacagggaacattctttccagaaaatccagctatcactgcatgtcaa
agtttgcttgacaagaatagagattcctggaaaatgttgaacttatctaaaaatttctac
ctacctcctttgaatgatgaggtcttacgacatgccatatttggtggagaaaatggacca
gtttctgctgtcaaaggaacagactatgcctttggttttcaatttggtgtatctgattat
gatgattcacagaatgacaccaaactgttggaagtcttgtttccttttcccactgttctt
ccttcttttcaggatgataaacgtatgtcagagcttttgccctttccaaaaaatagcacc
cttatttcaagagttcttagttggtttcaaagtgttgaaccaagaacaactccacttcca
gtggctattatacaggaatgcctaactttctacattaagaaacaggtggattatattggc
gggctcattttgtcaaaattaatgaatgaatggagattgatggatgaacttgcagtattg
cgtgccatatacttgttaggttcaggtgatttactgcagcactttttgactgtgattttt
ggtaagctggacaaaggagaaacttgggatgatgattttgagttaaacactatattgcag
gagtccattcggaactccgctgatggcacactgctaagtgctccagattctttggttgtt
tccatcaccaagaatcatggttttgacagtgatgagctgcctaatacacctaccctttcc
tcaactcctcgtaaaagtcgtctgcacaactttggcatagatggccttgattcactgaaa
ttcacatacaaggtctcttggccacttgaacttattgcgaatacagagtcaatcaagaag
tacaaccaagtaatggggttcctgttgaaggtgaagcgtgcaaaatttgctctagataaa
gctcggagatggatgtggaagggtagaggtaatgcgacaaatagccgcaagcatcactgg
ttagtggaacagaaactcctacattttgtggatgcctttcaccagtatgtcatggacagg
gtatatcacagcgcatggcgtgaactctgtgaaggtatggcagtagctgggtctctggat
gaagtcattgaagtacatgaggcctatttactatcaattcagcgacagtgcttcgtggtt
ccagataagctgtgggccttgattgctagccgaatcaacagcatccttggactggctctg
gatttctactccatacagcagacattaagtagcagtggagcagcttctgcaatgaaggct
agatgtgaaatggaagtggaacggattgaaaaacaatttgatgattgcattgcttttctc
ctcagagtcttatctttgaaactcaatgtgggtaacttccctcatttggctgatttggtt
accagaattaactacaaccatttctacatgtctgataatggaaacttgatgactgccact
ggctctgagatagtgacttcaagacttgggaagaccttcggatga
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