KEGG   Populus trichocarpa (black cottonwood): 18106454
Entry
18106454          CDS       T01077                                 
Name
(RefSeq) uncharacterized protein LOC18106454 isoform X1
  KO
K22761  DNA-directed primase/polymerase protein [EC:2.7.7.102 2.7.7.7]
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pop03400]
    18106454
   03029 Mitochondrial biogenesis [BR:pop03029]
    18106454
Enzymes [BR:pop01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     18106454
    2.7.7.102  DNA primase AEP
     18106454
DNA repair and recombination proteins [BR:pop03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    18106454
Mitochondrial biogenesis [BR:pop03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Mitochondrial DNA polymerase
    18106454
SSDB
Motif
Pfam: Herpes_UL52 Toxin_22
Other DBs
NCBI-GeneID: 18106454
NCBI-ProteinID: XP_024444899
LinkDB
Position
17:14720059..14725913
AA seq 643 aa
MGSKSTTMEDVDRLFECFKCGISPPQSAVRERKRSKGKIKNQGISINEASPGSAEQPKKK
IASNAVEGKNVSQGKQISPVVFYGSPHGVPPKRPISLLRLLREIRIDLAEQQKSQLSKEV
WATFPRQNEAMNFAKEHADVRIFSYQDHHNGQRRFLVSTYREFWRRYKNMDAKFRHHYEV
IQEGLPCHLYFDLEFSRRDNAERNGDEMVDLLISVTLEALFEKYSIQGNQDWIVELDSST
AEKFSRHLIIRIPKTAFKDNTHAGAFVSEICSRILSTRGRDEGFENMFIRKDSSSAEPPS
QLFIDAAVYSRNRCFRLALSSKAGKNSVLLPTERFKCKDMCEEDMFMSSLICSMDVDCNK
LLVCKMDMECMKTLQFDTEVNNDYRRHCTPKEFPLNGVPSDTGNSPFPALDKFIESIASI
GNISGKIRSWYWFSEYGLMVYSMSRNRYCERIGREHKSNHVMYVVDLRRADYYQKCHDPD
CQGYRSPLRPIPWNVISDPPYSYDSVQMVDQIGSTNDYLKLQHVSNECEDFLLCDNKHDP
DSCSKDSWWLEAIKVADDIENKQRTSMEPELCWGSGICLQSRFSMAGMSQRSSLKIDEVA
PLSLILTWIALTRKMTIGGRLWKKLHPNLNLFTSVNKWVLTDG
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgggatcgaaatcaacaacaatggaagacgtagatagattattcgaatgtttcaaatgc
ggcatttctcctcctcaatctgctgtgagagagagaaagagaagtaaaggaaaaatcaag
aatcaagggatttcaataaatgaagcatctcctggttcagctgagcaaccaaagaagaaa
attgcatcaaatgcagttgaaggaaagaatgttagtcaaggaaagcagatctctccggtt
gtgttttatgggtctccacatggagtgccaccaaaaagacccattagcttgttgagactt
ttgcgtgaaattcgcattgatctcgcggaacaacaaaaatcacaattgagtaaggaagta
tgggcaacatttcctaggcagaatgaagcgatgaattttgcaaaagagcatgcagatgta
cgcatttttagctatcaagatcaccataatggacaacgaaggtttcttgtttctacatac
agagagttttggagaagatacaaaaacatggatgctaaatttcgccaccattatgaagtg
attcaggagggtttaccatgccacctttattttgatctggagttcagtaggagagacaat
gcagaaagaaatggagatgaaatggtcgatctcttgatatcagtcaccctagaagcatta
tttgaaaagtattctattcaagggaaccaggattggatagtagagctcgactcttctact
gcagaaaagttctctcgccatttgatcatccgcatcccgaagactgcttttaaagacaac
acacatgcaggtgcatttgtttcagagatatgctctcggattcttagtacaagagggaga
gatgaaggatttgaaaatatgtttataagaaaagattcatcctctgctgaacctccaagc
caactttttatagatgctgctgtatattctagaaaccgctgctttcgcttagctctttca
tcaaaagcagggaagaattctgtcctgctgcctactgagcgcttcaagtgtaaggacatg
tgtgaagaagacatgttcatgtcatccttgatctgcagcatggatgttgattgcaataaa
cttcttgtctgcaaaatggacatggaatgtatgaagaccctgcaatttgatacggaggta
aacaatgattacagaagacactgcaccccaaaagaatttccattgaatggtgtgccaagc
gatactggaaactcaccattcccagccttggacaaattcatagaatctattgcctcaatc
ggaaatatatcaggaaaaatacgaagctggtattggttctcggagtatggactgatggtc
tacagcatgtccagaaatagatactgtgaacgaattggtagagagcataaaagcaatcat
gttatgtatgttgttgacttgagaagggcggattattatcagaaatgccatgatccagat
tgccaaggttaccgatcccctttacgtcccatcccttggaatgtgatctctgatcctcca
tattcttatgattcagtgcaaatggtggatcaaatagggtcaacaaatgattatcttaaa
cttcaacacgttagcaacgaatgtgaagattttctgctttgtgataacaaacatgaccca
gatagctgttctaaagattcttggtggcttgaagccataaaagttgcagatgatattgaa
aataagcagaggacatcgatggaaccagagttatgttggggatcagggatatgcctccag
agtaggttctctatggcaggcatgtcgcagagaagttctctcaaaattgacgaagtagct
ccattgtctctgatactgacttggatagcattgacgaggaagatgacaattggtggacgg
ctgtggaagaaactgcatcccaatctgaacttattcacttcagttaataaatgggtgttg
acagatggttga

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