Populus trichocarpa (black cottonwood): 18106518
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Entry
18106518 CDS
T01077
Name
(RefSeq) proline--tRNA ligase, chloroplastic/mitochondrial
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18106518
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
18106518
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
18106518
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
18106518
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
18106518
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
18106518
Prokaryotic type
18106518
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
18106518
NCBI-ProteinID:
XP_006372448
UniProt:
U5FGZ5
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All DBs
Position
17:14285292..14290620
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AA seq
547 aa
AA seq
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MVSSLRLPSLTSLFSSPYLRRPPPLLRRPHHHHHKLSFPPPLTTAFSSQTTSASTTENPK
KQTNQDQKVITPRSQDFNAWFLDIIANAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVK
FKETGHSNMYFPQFIPFSFIEKEASHVEGFSPELALVTIGGGKELEEKLVVRPTSETIVN
HMFTQWIHSYRDLPLMVNQWANVTRWEMRTKPFVRTLEFLWQEGHTAHANPEEAENEALQ
MIDVYTKFAYEQAAIPVIAGRKSKAETFAGADRTYTIEAMMGDRKALQAGTSHNLGQNFS
RAFGTQFMDENGERQHVWQTSWAVSTRFIGGIIMTHGDDSGLMLPPKIAPIQVVIVPIWK
KEDEKTGVLNAASSVKKVLQSAGIKVKLDDTDQRTPGWKFNFWEMKGVPLRIEIGPRDVS
SASVVISRRDVPGKQGKVFGISMEPSILEAYVKDKLDEIQSSLLGMATSFRDSNIVDVSS
YDELKAAITLGKWARGPWSASDADEKRVKEETGATIRCFPFEQPQGTKTCLMTGSPAEEV
AIFAKSY
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggtatcatctcttcgactcccctcactaacctccctattctcctctccctacctccgc
cgccctcctcctttactccgccgtcctcaccaccaccaccacaaactctccttccctcca
ccactaaccacggccttctcctcccaaaccacatcagcatccacaaccgaaaaccccaag
aaacaaactaaccaagaccaaaaagtaatcactcctcggtctcaagacttcaatgcttgg
tttcttgacatcattgctaacgctgaacttgctgattatggtccagttcgtggcaccatg
gtcattcgtccctacggttatgccatctgggaagccattcaggattatttgaatgtgaag
tttaaggagactggacatagtaacatgtactttcctcagtttataccattctcctttatt
gagaaagaagctagtcatgttgaggggttcagtccagaattggctcttgtaactattggg
ggaggaaaggaacttgaagaaaaacttgtggttcgacccactagtgaaaccatagtgaat
cacatgtttactcagtggattcatagttaccgtgatcttcctctcatggtaaaccagtgg
gcaaatgtcacaagatgggagatgcgcacaaagccgtttgtgaggactcttgaatttctg
tggcaggagggtcacacagctcatgcaaatccagaggaggcagaaaatgaggcattgcag
atgattgatgtctatacaaaatttgcttatgagcaagctgcaatacctgttattgcaggt
agaaaatcaaaagcagaaacttttgctggtgctgataggacatatacaatagaggctatg
atgggtgatcggaaagcattacaagctggaactagccacaacctcgggcaaaacttttct
cgggcttttggaacacagtttatggatgaaaatggagagaggcaacatgtgtggcagaca
tcatgggctgtcagcacccgctttattggtggtattattatgacccatggagatgattct
ggtctaatgctacccccgaaaattgcaccaatacaggtggtgattgtgccaatctggaaa
aaagaggatgaaaaaactggagtactcaatgcagcatcttctgtaaaaaaagtcttgcaa
tctgctggtatcaaagttaagctcgatgacacagatcagagaaccccgggatggaagttc
aatttctgggagatgaagggagtccctctgaggattgaaattggtcctcgagatgtttca
agtgcaagtgtggtcatatctaggagagacgttcctggaaagcaaggaaaagtgtttgga
atatccatggagccttcaattttagaagcttatgtcaaggacaagttggatgagatccag
tcatctcttctgggaatggcaacatcatttcgggatagtaacattgtggacgtgagctca
tatgatgaactcaaagcagcaataacccttggtaaatgggctaggggtccttggtcagct
agtgatgcggatgaaaaaagagtaaaagaagaaacaggggcaacaattcggtgtttcccc
tttgaacagcctcaagggaccaaaacatgcttgatgactggcagcccagcagaagaagtt
gcaatttttgcaaaatcttattaa
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