Populus trichocarpa (black cottonwood): 18106532
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Entry
18106532 CDS
T01077
Name
(RefSeq) auxin response factor 8
KO
K14486
auxin response factor
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18106532
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
PB1
Motif
Other DBs
NCBI-GeneID:
18106532
NCBI-ProteinID:
XP_024445249
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Position
17:14158693..14167610
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AA seq
815 aa
AA seq
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MKLSTSGLGGQQAGQEGEKKCLNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTN
KEVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGM
PSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWK
FRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSS
VLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHIRVSVGMRF
RMLFETEESSVRRYMGTITGTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEP
LTSFPMYPSLFPLRLKRPWHPGSSSLLDSRDEASNGLIWLRGGSGEQGLPSLNFQANMLP
WMQQRLDPTMLGNDHNQQYQAMLAAGMQNLGGGDPLRQQFMQLQQPFQYPQQSSSPNPLL
QLQQQHQAMLQSIPHNILQPQNQISSDSLPRHLLQQQLNNQPDDQAQQHQHAYHDGLHIQ
TDLLQRQQSNLPSPSFSKTEYMDSSPKFTVSTTPMQNILGSLCTEGSGNLLDFTRAGQST
LTEQLPQQSWVPKYAHHDVNAFSNSLSLPRTYPEKDLSVEAENCNSDAQNPTFFGLLLPT
TVPRYPTSTVDTDVSSMPLGDSGFQNSLYGCVQDSSELLPNAGQMDPPTPSRTFVKVYKS
GSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWE
LFVNNVWYIKILSPEDVLKMGEQGFESSGPNAVKG
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttcaacatcagggttgggtggtcagcaagcgggtcaagaaggggagaagaaa
tgtttaaattcagagttgtggcatgcttgtgctggaccactggtgtccctaccaactatg
gggagcagagtggtctacttccctcagggtcacagtgagcaggtagctgcaactactaac
aaagaagttgatgcacacataccaaattatcccagcttgccgccccagttgatatgccag
ctccacaatgtcactatgcatgcagatgttgaaacagacgaagtttatgcccagatgaca
ttacagcctttgacgccacaagagcaaaaggagacttttcttcccttggacttgggaatg
ccaagcaagcagcccacaaattatttttgcaagacattgactgcaagtgatactagcaca
catggaggattttctgttcctcgtcgcgctgctgaaaaagtctttcctcccctggatttc
acccagcagcctccagctcaggaacttatcgctagggatctccatgatgttgaatggaag
tttcggcatattttccgaggacagcccaaacggcatctacttacgacaggttggagtgtg
tttgtaagtgccaaaagacttgttgctggagattctgttctttttatctggaatgagaaa
aaccagcttcttttgggaattcgccgtgccactcgaccgcaaactgtaatgccatcatct
gtgttatctagtgatagcatgcacattggactccttgctgctgctgctcatgctgctgcg
actaatagctgtttcacagtgttctataacccaagggctagtccatctgagtttgttata
cctctatccaaatatgttaaagcagtttttcacatacgtgtttcagttggaatgcgcttc
cggatgctttttgagactgaagaatcaagtgtccgtaggtacatgggaacgataactggc
acaagtgatctagatcctgttcgctggcctaattcacattggcgatctgtcaaggttggt
tgggatgagtccacagcaggtgagaggcagccaagggtgtctttatgggagattgaacct
ttaaccagttttcccatgtatccatcactatttcccctccgactgaaacggccttggcat
cctgggtcctcatctttgcttgatagcagagatgaagcaagtaatggcttaatatggcta
aggggtggaagtggagaacaaggtcttccatctctgaattttcaagctaatatgctcccc
tggatgcagcagaggctagatccaacgatgctgggaaatgatcataatcagcagtaccag
gccatgttggcggctggtatgcaaaacctgggaggtggagatcccttgaggcagcaattt
atgcagcttcagcagccttttcaatacccccaacagtctagcagccccaatcctctgttg
cagctgcagcagcaacatcaagcaatgctacaatccatccctcataatattctgcaacca
caaaaccaaatttcttcggacagcttgccccgtcacctcctacagcagcaactcaacaat
cagccagatgatcaggctcagcaacaccaacatgcctatcatgatggactgcacattcaa
actgatctactccagagacaacagtcaaatttgccttctccatcattttcaaaaacagaa
tacatggactcaagcccaaagttcacagtatctactaccccaatgcaaaacatactaggt
tctttgtgtactgaagggagcggtaatcttctggacttcaccagagctggtcagtccaca
ctaactgaacagttaccccaacagtcctgggtcccaaagtatgcacatcatgatgtcaat
gctttttctaattcactctctctcccacgaacctaccctgagaaagatctttcagtggaa
gcagaaaactgtaattctgatgcccagaatcctactttctttggactcctgctacctacc
acggtgcccagataccctacttcaacagttgatactgatgtctcctcaatgccattaggg
gattctgggttccagaattctctgtatggttgtgtgcaagactcttctgagttattgcca
aatgcaggacagatggacccaccaaccccaagtcgaacatttgtcaaggtctacaaatca
ggatcggttgggcgctcattggacatatcccggttcagcagctatcatgagctgcgagaa
gaactggctcagatgtttggaattgaggggaaattggaaaaccctcatagatcaggctgg
cagcttgtatttgtcgacagggagaatgatgtacttctccttggagatgatccctgggag
ttatttgtgaacaatgtttggtatataaagatactttctccggaggacgttttaaaaatg
ggagagcagggttttgaatcctctggcccaaatgctgtcaaaggatga
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