Populus trichocarpa (black cottonwood): 18106561
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Entry
18106561 CDS
T01077
Name
(RefSeq) trans-cinnamate:CoA ligase, peroxisomal
KO
K23618
acyl-activating enzyme 11/12 [EC:
6.2.1.2
6.2.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pop01004
]
18106561
Enzymes [BR:
pop01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.2 medium-chain acyl-CoA ligase
18106561
Lipid biosynthesis proteins [BR:
pop01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
18106561
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
18106561
NCBI-ProteinID:
XP_006372491
UniProt:
U5FGM7
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Position
17:complement(13951794..13953941)
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AA seq
586 aa
AA seq
DB search
MDQLLKCDANYVPLTPITFLKRANAVYANRTSVIYEGTRFTWSQTYERCCRLADSLRSLN
VGKNDVVSVLAPNIPAVYEMHFAVPMAGAVLNTINIRLDAKNIATILSHSGAKVFFVDYQ
YKELASKALSFLDGAVPSIIACIDDIDTPTGVQFGQLEYEQLVQRGNPGYTGELVQDEWD
PIALNYTSGTTSAPKGVVYSHRGAYLSSLSLILGWEMGNAPVYLWSLPMFHCNGWTFTWG
VAARGGTNVCIRNTSAKDMYHNIAEHAVTHMCCAPIVFNVLLEARPHERREITSPVEILT
GGAPPPASLLQDIERLGFHVTHAYGLTEATGPALVCEWQKKWNKLPQQDQAKLKARQGIS
ILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSSIMKGYFKDPEATSKAFRNGWFATGDV
GVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYRHPRVLEAAVVAMPHPKWGESPCA
FISVKKNSNGDTNDVKESDIIAYCKKNLPHFTVPKRVEFMAELPKTSTGKIQKFQLRALA
QNFVVNEILPSKKINGHSQPSASGRVNTEVTEYAQGHEQVLALSRL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggatcaactactaaaatgcgatgcaaattatgttcctctcacccccataactttcttg
aagagagctaatgctgtttatgccaaccgtacctctgttatctatgagggcacccgcttc
acatggagtcaaacatatgaacgttgctgccgccttgccgattccctccggtcccttaac
gtcggaaaaaacgatgtcgtgtctgtgttggctccaaacattcctgcagtgtatgagatg
cattttgctgtgcctatggctggagcagttcttaatactatcaacataaggctagatgct
aagaatatagccaccattcttagccattcaggggctaaggttttctttgtggattaccaa
tacaaggagttagcaagtaaggcccttagtttcctggatggcgctgtaccatcaattatt
gcttgtattgacgacatcgacacacctaccggtgtccagttcggccagctggagtatgaa
cagcttgtccagaggggcaatccaggatacactggtgagctagttcaagatgaatgggat
cctatagccttgaattatacatcaggaacaacatctgctccgaaaggagttgtgtatagt
cacagaggtgcttatcttagctctcttagcctaattcttggatgggaaatgggaaatgca
cctgtttatctatggtctctccctatgttccattgcaatggctggacattcacttggggt
gtcgcggcacgaggcggaaccaacgtttgcatacgcaacaccagtgctaaagacatgtac
cataacattgccgaacatgcggtgactcacatgtgctgtgcaccaattgttttcaacgtt
ctgcttgaggccaggcctcatgagcgccgcgaaatcacttccccggttgaaatactcact
ggaggcgcacccccaccagcctcgttgctccaagatatcgaacgtctcggattccacgtg
acgcatgcctatggtcttaccgaggctactggtccagcacttgtgtgtgaatggcagaaa
aagtggaacaagcttccacagcaggatcaggcaaaactcaaggcgaggcaagggattagc
atactgactcttgctgatgcagacgtcaaggacttggacaccatggttagcgtgccgcgt
gatggaaagacaatgggggagattgtcctgagaggaagcagcatcatgaaaggttacttc
aaggatcccgaggcaacttccaaggccttcaggaatggatggtttgctactggagatgtt
ggtgtcattcatcctgatggttacctggaaatcaaggacaggtcgaaagatgtgataatt
tctggtggtgaaaatatcagcagtgtagaattggagtctgtactctacagacatccaaga
gtcctggaagcagctgtggtggccatgccacatcctaaatggggagaaagtccttgtgca
ttcatctcagtgaaaaagaactccaacggagacacgaacgatgtcaaagaatctgatatt
atcgcttactgcaagaaaaaccttccccattttactgttccaaagagagtggaattcatg
gctgagttaccgaaaacctcaacaggaaaaattcagaagttccagttaagggctttggcg
cagaattttgttgtcaatgagatattgccaagcaagaaaattaatggacacagccaacct
tcagcttccggtcgagtcaatacagaagtaacagaatatgctcagggccatgaacaagtt
cttgctctatctcgtctttga
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