Populus trichocarpa (black cottonwood): 18106595
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Entry
18106595 CDS
T01077
Name
(RefSeq) receptor protein kinase TMK1
KO
K00924
receptor protein kinase TMK [EC:
2.7.11.1
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18106595
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pop01001
]
18106595
Enzymes [BR:
pop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
18106595
Protein kinases [BR:
pop01001
]
Serine/threonine kinases: TKL group
IRAK family
18106595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
LRR_8
LRR_4
LRR_1
LRRNT_2
LRR_14
LRR_ComC
ABC1
TM_ErbB1
LRR_Zer-1
APH
Cadherin_C_2
Insulin_TMD
CR_prot_dom_plant
PIP49_C
Motif
Other DBs
NCBI-GeneID:
18106595
NCBI-ProteinID:
XP_006372526
UniProt:
U5FGQ1
LinkDB
All DBs
Position
17:13677288..13681105
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AA seq
945 aa
AA seq
DB search
MKRRSHRRTKLLLVFLVGFSSIFHFANSQTSPDAEVMFSLKKSLNVPDSLGWSDPDPCNW
NHVVCSDEKRVTRIQIGRQNLQGTLPSNLRNLAQLERLELQYNNISGPLPSLNGLSSLQV
ILLSDNKFISVPSDFFTGLSSLQSVEIDNNPFSNWVIPESIKNASALQNFSANSANISGS
IPGFFGPDSFPGLTILRLAFNDLEGELPASFSGSQVQSLWLNGQKLSGGIDVIQNMTLLR
EVWLHSNGFSGPLPDFSGLKDLESLSLRDNSFTGLVPESLVNLESLKFVNLSNNLLQGPM
PVFKSSVSVDMVKDSNRFCLPTPDLCDSRVNTLLSIVKSMDYPQRLADSWKGNDPCADWI
GITCNNGNITVVNFEKMGLTGSISPDFASVKSLERLVLANNNLTGSIPQEITTLPGLKVL
DVSNNHLYGRVPAFTSNVIVNTNGNPNIGKDVNISTSSESPSASPSANTGSGSGGSSRKS
GKKSSTLIVVIIFSVIGGVFLLSLIGLLVFCLYKKKQKRFSRVQSPNEMVIHPRHSGSDN
ESVKITVAGSSISVGAISETHTIPASEQGDIQMVEAGNMVISIQVLRNVTNNFSEENILG
WGGFGVVYKGELHDGTKIAVKRMESGVISGKGLTEFKSEIAVLTKVRHRHLVALLGYCLD
GNEKLLVYEYMPQGTLSRHIFNWAEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIH
RDLKPSNILLGDDMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVD
VFSFGVILMELITGRKALDERQPEESLHLVTWFRRMHLNKDTFRKAIDPTIDLNEETLAS
ISTVAELAGHCCAREPYQRPDMGHTVNVLSSLVELWKPTDQSSEDIYGIDLEMSLPQALK
KWQAYEGRSNMDSSSSLLPSLDNTQTSIPARPYGFAESFTSADGR
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaagaagccatcggagaacgaaacttttactagttttccttgttgggttttct
tcaatctttcattttgcaaactctcaaacaagcccagatgctgaagttatgttctctctc
aaaaaaagcctcaacgtgccagattcacttggatggtccgatccagatccatgcaactgg
aaccatgtagtatgttcggacgaaaagcgggtcaccaggatccaaattggacgccaaaac
cttcaaggtacactcccttcaaatctccgaaaccttgctcaacttgaacgtttagagctt
cagtataacaacatttccggtcctttgccaagtttaaacgggttaagttcattacaagtg
atccttctaagtgacaataagttcatttcagtccctagtgactttttcactggtttatct
tcacttcaatctgtggagatcgataacaacccgttttccaattgggtcataccagaaagt
ataaaaaatgcttctgctttgcagaatttctctgcaaactcagctaatatatccgggtca
ataccgggtttttttggcccggattcttttccgggtctaaccatcttgaggttagctttc
aatgatcttgaaggtgagttgcctgcaagtttttcggggtcacaagttcagtctttgtgg
cttaacgggcagaaacttagtggtggcattgatgttattcagaacatgactttgttaaga
gaagtttggttgcattctaatgggttttcgggtcccttacctgacttctcgggtttgaaa
gatttagagagcttaagtttaagagataattcatttactggccttgttcctgagtctttg
gttaaccttgagtcgttaaagtttgtgaatttgtcgaataatttgcttcaaggaccaatg
cctgtgtttaagagctcagtttctgtggatatggttaaggattcgaacagattctgtctg
ccaactcctgatttgtgtgattcgcgagttaacacattgctttcgattgtgaaatcaatg
gattatccgcaaaggttggcggatagttggaaggggaatgatccatgtgctgattggatt
ggaattacttgcaataacgggaacatcacagttgtcaactttgagaagatggggctaaca
ggctcgatttctccagattttgcttcggttaagtcattggaaagattggttcttgcaaat
aataacctcacaggttcgattccacaagaaattactaccttacccggacttaaagtgctt
gatgtgtcaaacaatcacctgtatgggagagttccagcctttaccagtaatgtgattgtt
aacactaatggtaatccaaatatagggaaggatgtgaatatttctacatcttcggaatca
ccatctgcaagtccatcggcgaatactggctccggaagtggtggtagttcaagaaaaagt
ggcaagaaatcttctactttgattgtagtaattatattttcggtaattgggggtgttttc
ctgttgtccttgatcggcttgttggttttctgtctatacaagaagaaacaaaagcggttt
agcagggtacagagtccgaatgaaatggtgattcatcctcgccattctgggtctgataat
gagagtgtgaagattacagttgctggctcaagtatcagtgttggtgctattagcgaaaca
catactattcctgcaagtgaacaaggtgacattcaaatggttgaggctgggaacatggtc
atttctattcaagtgttacggaatgttacaaacaatttcagtgaagaaaatatattggga
tggggaggttttggagtggtctacaaaggtgagttgcatgatggtacaaagattgctgtg
aagaggatggagtcgggtgtcataagtggtaagggactaactgagttcaagtctgagatt
gctgttttgaccaaggttaggcaccgacatctcgttgctcttcttgggtactgcttggat
ggtaatgagaagcttcttgtgtatgaatatatgccacaagggacactcagtagacatatc
ttcaactgggcagaagaaggattgaaaccactagagtggacaaggaggttgactatagcc
ttggatgtggcaagaggtgttgagtaccttcatggtttggctcatcaaagctttatacac
agggacttgaagccttcaaacattcttcttggggatgatatgagggctaaggttgcagac
tttggtcttgtgcgtcttgcaccagagggtaaaggctctattgaaactagaattgctgga
actttcggatacttggcaccggaatatgcagttactggtcgagtgacaactaaagttgat
gtcttcagtttcggagtgatattgatggagcttataacgggtagaaaagctcttgatgag
aggcaacctgaagagagcttgcatcttgtaacatggttccgcagaatgcacctgaacaag
gacacattccggaaggccatcgatcccacaattgacctcaatgaggagacacttgctagc
atcagcaccgttgcagagttggcaggtcattgctgcgcaagggaaccgtatcaaaggcca
gacatgggtcatactgtgaatgttctctcttctctggtggagctctggaaaccaaccgac
caaagttctgaagacatatatggtattgaccttgaaatgtccttgccgcaggcacttaag
aagtggcaagcttatgaaggtagaagcaacatggattcttcttcttcactccttcccagc
ttagacaatactcagaccagcatacctgcacgcccatatgggtttgctgagtcatttaca
tcagctgatggaagatga
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