Populus trichocarpa (black cottonwood): 18106632
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Entry
18106632 CDS
T01077
Name
(RefSeq) transcription factor MYB20
KO
K09422
transcription factor MYB, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18106632
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
18106632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
18106632
NCBI-ProteinID:
XP_006372565
UniProt:
U5FLU9
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All DBs
Position
17:13322885..13324998
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AA seq
321 aa
AA seq
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MGRQPCCDKVGLKKGPWTSDEDKKLITFILANGQCCWRAVPKLAGLLRCGKSCRLRWTNY
LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
IDPLTHKPLSTIETPPSPPPQQEVQVQEKIQEIEQQAVQQSCSPNIVSELDQNKEPETSL
RSTVTQEEEINNMAASTYGTMEQTDGFCIDEVPLIEPHEILVPCGLSPSSTPAPTSSSSS
STSSSSSSYGSNNILEDLLLPDFEWPINNVDIGLWGDYLNSWDVLISDAVGDWKQTTMFD
PPLNQCSRMILDQDSWTNGLL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggcaaccatgttgtgacaaagttgggttgaagaaagggccatggacttctgat
gaggataagaaactcattaccttcatcctcgctaatggtcaatgttgctggagagctgtt
cctaagcttgcaggattgttaaggtgtgggaagagttgcaggctgagatggacaaactat
ctcaggccagatttgaagagaggtcttttatcagaatacgaagagaagatggtgattgat
ctccacgctcaacttggcaacagatggtctaagattgcatcacatctacccggcagaact
gataatgaaatcaagaaccattggaatactcacatcaagaaaaagttaaggaaaatggga
attgatcctctcactcacaagccactctctaccattgaaacaccgccgtcaccaccacca
cagcaagaagttcaagtgcaggagaaaatacaagaaatagagcagcaagctgtacaacag
tcttgttcccctaatatcgtatctgaactggaccaaaataaggaacctgagacatcatta
cgatcaacagtaactcaagaggaagagatcaataacatggccgcaagcacatatggcaca
atggagcaaacggatggtttttgcatagatgaagttccgctaattgaaccccatgaaatc
ttagtcccttgtggactttctccttcatcaaccccagccccaacctcttcatcatcgtca
tcgacatcatcttcttcttcttcatatggttcaaacaatatccttgaagacttgctactg
ccagattttgaatggcctattaataatgtcgacattggcttgtggggtgattacctgaac
agttgggatgtgctaatcagtgatgctgtcggtgattggaagcaaacaacaatgtttgat
cctcctctcaatcagtgctcaagaatgatattggatcaagattcttggacaaatgggctc
ttgtga
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