Populus trichocarpa (black cottonwood): 18106708
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Entry
18106708 CDS
T01077
Name
(RefSeq) ABC transporter G family member 11
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop02010
ABC transporters
pop04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
18106708
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
18106708
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pop02000
]
18106708
04147 Exosome [BR:
pop04147
]
18106708
04090 CD molecules [BR:
pop04090
]
18106708
Transporters [BR:
pop02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
18106708
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of breast milk
18106708
CD molecules [BR:
pop04090
]
Proteins
18106708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
AAA_29
SMC_N
RsgA_GTPase
AAA_16
nSTAND_NTPase5
AAA_23
AAA_25
Cytidylate_kin
AAA_22
AAA_18
AAA_33
AAA_5
nSTAND1
NACHT
AAA_28
AAA_17
Motif
Other DBs
NCBI-GeneID:
18106708
NCBI-ProteinID:
XP_024444178
LinkDB
All DBs
Position
17:15181390..15185732
Genome browser
AA seq
705 aa
AA seq
DB search
MAKNPSTNNVTMEIETSIPSEVVDGIMVGLSPLSETLWRDRTKTEFVGDVSARLTWKDLT
VMVTLSNGETQRVLEGLTGYAEPGTLTALMGPSGSGKSTLLDALSSRLAANAFLSGTVLL
NGRKTKLSFGTAAYVTQDDNLLGTLTVRETISYSARLRLPDKMPWSEKRALVESTIIEMG
LQDCADTVIGNWHLRGISGGEKRRVSIALEILIRPRLLFLDEPTSGLDSASAFFVTQTLR
GLSRDGRTVIASIHQPSSEVFELFDRLYLLSGGKTVYFGQVSEAYEFFAQAGFPCPALRN
PSDHFLRCINSDFDKVKATLKGSMKLRFEASDDPLEKITTAEAIRTLIDHYRTSQYCYAA
REKVEEISKVKGNVLEAGGSQASFLMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTICI
GTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVVAF
VISNTISAMPFLIMITFISGTVCYFMVRLHPGFEHYVFFVLCLYASVTVVESLMMTIASI
VPNFLMGIIIGAGIQGIFMLVSGYFRLPNDIPKPVWRYPMSYISFHFWALQGQYQNDLKG
LLFDNQSPDLPKIPGEYILENIFQIDVHRSKWVDLSVIFSMIVIYRIIFFIMIKISEDIT
PWIRGYIAKRRMQQKNGTQNTTVAPDGLIHSPSLRNYVADRPTEM
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacccatcaacgaataatgtaacaatggagatagagacaagcataccatca
gaggttgtagatggaataatggtaggtttgagtcctctaagcgagaccctttggagggac
agaactaaaacagaattcgtaggagatgtgtcggcaaggcttacatggaaggatctgact
gtgatggttaccctcagcaatggagaaacacagagggttttggagggacttactggctat
gctgagcctggaactctcactgcacttatgggtccttctggctcgggcaaatccactctc
cttgatgctctctcaagtcgccttgctgctaatgccttcctctctggaacggttctcctc
aatggtcgcaaaaccaagctctctttcgggaccgctgcctatgtaacacaagatgacaac
ttgcttggtactctgacggtgagggaaacaatctcctattcagctcggctacgtcttcct
gataagatgccctggtcagagaagcgtgccctggttgagagtaccataatagagatgggt
ctccaagattgtgctgatactgttattgggaattggcatttgcgtgggatcagtggggga
gagaagagaagggtcagcattgctcttgaaatcctgataaggcccagactgctctttctc
gatgaaccaactagtggacttgacagtgcttcagctttctttgtaactcagaccctccgc
ggcttatctagagatggcagaactgtcattgcttcaatacaccagcctagcagtgaagtt
tttgagctttttgatagactgtacttgctttcaggaggcaaaactgtttacttcggtcag
gtttcagaggcatatgagttctttgcacaagctggctttccctgccctgctttgaggaac
ccttctgatcatttccttaggtgcatcaattctgacttcgacaaagtgaaggctactttg
aaagggtccatgaaactgcggtttgaggcaagtgatgatcctctggagaagataaccacg
gctgaagctatcagaactctgattgatcactatcgaacttctcagtactgttatgcagca
agagaaaaagtcgaggagatatccaaagttaaaggaaatgtgctagaagcaggagggagc
caggctagtttcttgatgcaggcctttactttaacaaagcgttcgttcatcaacatgtca
agggactttgggtattactggcttcgactagtgatttatattgtggtcactatctgcatt
ggaactatctatctcaacgtggggacgggttacaattctatactggcaagagggtcgtgt
gcctcatttgtctttggtttcgtcacgttcatgtcaattggtgggtttccttcctttgta
gaggaaatgaaggtcttccaaagagaaaggctaaatgggcactatggtgtggtcgcattt
gtgattagcaacaccatttctgcaatgccgttcctgataatgattacttttatttctgga
actgtttgttatttcatggtccgccttcatccaggatttgaacattatgttttcttcgtg
ctgtgcctttatgcgagtgtcaccgtagttgaaagcttgatgatgaccatagccagcatt
gtccctaatttcctcatgggcattatcattggggctggaattcagggaatattcatgcta
gtatctgggtactttaggctcccaaatgacataccaaagcctgtgtggagatacccaatg
tcgtacattagcttccacttctgggctctacagggacaataccaaaatgatttgaaagga
ttgctgttcgacaaccaatcgcctgatcttcccaagatacctggcgagtacatactggaa
aacatattccagattgatgtgcaccggtccaaatgggtagatctcagcgtcatattcagt
atgattgtcatctaccgcatcatcttctttatcatgatcaagatcagtgaggatattacc
ccttggatcaggggttacatagcaaagagaagaatgcagcagaagaatggaactcaaaat
acaacagttgctcctgatggtctcatccactcaccttctctgaggaactatgttgccgat
cgtccgactgagatgtag
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