Populus trichocarpa (black cottonwood): 18106803
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Entry
18106803 CDS
T01077
Name
(RefSeq) transcription activator GLK1 isoform X1
KO
K28172
GARP family transcription factor, GLK subfamily
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18106803
Transcription factors [BR:
pop03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
18106803
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
18106803
NCBI-ProteinID:
XP_006372753
LinkDB
All DBs
Position
17:complement(1149439..1153310)
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AA seq
427 aa
AA seq
DB search
MLAVSPFRNTATTKNESQEQMESYSTIVNGEFPDFCDGDLLESIDFDDLFVSINEKDVLP
NLEMDPEILAEFSVSGSGGEESDVNTSMSNEKVEDNSIRRKDEEDKFSGSGLDSSLSSRG
EEIVSKKDESVVVNPVPSEDGEKGRKPTTQGKNNNNQRKRKMKVDWTPELHRRFVQAVEQ
LGVDKAVPSRILELMGIDCLTRHNIASHLQKYRSHQKHLLAREAEAASWSQRRQMYGTAA
ASGGGGKTDISAWHAPTMGFPPIIPMHHHFRPLHVWGHPSMDQSLMHMWPKHLAHSPYSP
LPPPPTWHQPDPSYWHHHAHQRGPNVLNPGTPCYPQPPATRFHAPPVPGIPPHAMYKVDP
GTGVPARHNSGPDPFLDLHPTKESVDAAIGDVLSKPWLPLPLGLKPPATDSVLVELQKQG
VPKIPPT
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgtgtcacccttcagaaacactgcaaccaccaagaatgagagccaagaacag
atggagagttattctactattgtcaatggagagttcccggacttctgcgatggggacttg
ctcgaaagcatcgatttcgatgatctttttgtcagtattaatgaaaaggatgttttgcca
aatttggagatggatcccgaaatccttgctgaattctcagttagtggtagcgggggcgag
gaatcggatgtgaacacatctatgtcgaatgagaaagtggaggataatagtattcgaagg
aaagatgaggaagataagttttcaggttcaggtttggactcgagtttgagtagtagagga
gaggagattgtgagtaagaaagacgagtccgtggttgttaatccggtgcccagcgaagat
ggtgaaaagggaagaaagccaacaacacaagggaagaacaacaataatcaaaggaagagg
aaaatgaaggtggattggacaccagagctgcacaggaggttcgtgcaagcagtggagcag
ctaggggtggataaggcagtgccttcgaggattttagaacttatgggaattgactgtctc
actcgccataatattgctagccatcttcaaaaatatcgatcgcaccagaaacatttgcta
gcgcgtgaggccgaggcagcaagctggagtcaaagacggcaaatgtatggaaccgctgcc
gcgtctggtggaggtggaaagacggacataagtgcatggcatgcacccaccatggggttc
cctcctataatccccatgcaccaccactttagaccattacatgtatggggacatccctcc
atggaccagtccctaatgcatatgtggcctaaacatctagctcattctccttattcaccg
ctgccgccgccacctacatggcaccaaccagacccttcatattggcaccaccacgcccac
caaaggggtccaaatgtactaaacccagggacaccatgctatccacagccaccagcaact
agatttcatgcacctcctgtcccaggaatcccaccccatgccatgtacaaagtagatccc
ggcactggcgtcccagccagacacaattcaggccccgaccctttcttagaccttcatccg
acaaaagagagtgtcgatgcagctattggtgatgttttatcgaagccatggctgccactc
cctcttggactgaaacctccagctactgatagtgttctagtggagctgcaaaagcaagga
gttccaaagataccaccaacgtga
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