Populus trichocarpa (black cottonwood): 18106815
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Entry
18106815 CDS
T01077
Name
(RefSeq) zinc finger protein NUTCRACKER
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18106815
Transcription factors [BR:
pop03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
18106815
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_6
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
18106815
NCBI-ProteinID:
XP_006372765
UniProt:
U5FMI7
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Position
17:complement(1256606..1259596)
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AA seq
475 aa
AA seq
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MLEKIMATEEAITSSNNGFVENPVGGSNPPALKKKRNLPGTPDPEAEVIALSPKTLMATN
RFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVKKRVYVCPEKTCVHHHPSRALG
DLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFI
THRAFCDALAEETARVNAVSSINNLTAGSINYHLMGNPLGPNMAQHFSSIFKPISSNDHQ
TRQGGVSLWMNQGVPQVSEALMGNNIQEIHQLRSANSSGAMFGDLLAVSCSHAPPSDHYQ
FNWPVFGNKISSNNAHEELTSTLVLPLTNVKEAAAASQLASVPSLYSTQQQQSHQTTSAN
MSATALLQKAAQIGATSTDPSFLGSFALKSNAKKVQDGNKFCGLYGSSPVSTNPASDVEN
SGSDQISSLNQLQMYPKRQKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSINGWI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttagagaagatcatggcaacagaagaagcaataacaagtagtaacaatggttttgtt
gaaaaccctgttggtggatccaatcctcctgctctaaagaagaagagaaacctcccagga
actccagatcctgaagcagaagtcatagctttatcaccaaaaactctcatggccaccaac
agattcttgtgtgaaatatgcggtaaagggtttcagagagatcaaaacctacaactccat
aggagaggacacaaccttccatggaagctcaagcaaaggactaacaaagaagtaaaaaaa
cgtgtttatgtctgccctgaaaagacctgtgtccatcatcatccttctagggctcttgga
gacttaacaggtataaagaagcacttttgtaggaagcatggagagaagaagtggaagtgt
gaaaaatgttcaaaaagatacgctgtgcaatcagattggaaagcgcactcaaagacttgt
ggcactagggagtacaaatgtgactgtgggactctattttcaaggagagatagcttcatc
actcacagggccttctgtgatgccttagcagaggaaacagcaagagtaaatgcagtatct
agcataaacaacttgactgctgggagcatcaattatcatctgatggggaatccattaggg
cctaacatggcacaacatttctcttcaattttcaagccaatttcaagcaatgatcaccaa
acaagacagggaggagtttccttgtggatgaaccaaggagtaccccaagtgagtgaagca
ttaatgggcaataacattcaagagattcatcaacttcgctctgcgaatagttcaggagct
atgtttggtgaccttcttgctgtttcatgctcacatgctccaccatctgatcattatcag
ttcaattggccagtttttggaaataagatctcttcaaataatgctcacgaggagctgaca
agcactttagtacttcctttaaccaacgttaaggaagcagctgctgcaagtcagctagca
agtgttccttcattgtatagcacccaacaacagcagtcccatcaaacaacttcggccaac
atgtcagccactgctttgctgcaaaaagctgctcagatcggtgcaacttcaactgatcca
tcattccttggaagttttgcgctaaagagcaatgctaaaaaagttcaagatgggaacaag
ttctgtggactatatggttcaagccctgtaagcactaatccagcaagcgacgtggagaac
tcgggaagtgatcagatctcctctttgaatcagcttcaaatgtaccctaaaaggcagaaa
atatttcaaagtgatcaagatagtcctgcaggagggcaaactagagactttcttggtgtt
ggtgtacaagccatatgccacccatcatctatcaatggctggatttaa
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integrated database retrieval system