Populus trichocarpa (black cottonwood): 18106876
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Entry
18106876 CDS
T01077
Name
(RefSeq) protein SHORT-ROOT
KO
K27743
protein SHORT-ROOT
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
18106876
Transcription factors [BR:
pop03000
]
Eukaryotic type
Other transcription factors
GRAS
18106876
BRITE hierarchy
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GFIT
Motif
Pfam:
GRAS
POX
Motif
Other DBs
NCBI-GeneID:
18106876
NCBI-ProteinID:
XP_006372828
UniProt:
U5FI43
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Position
17:1703320..1705147
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AA seq
441 aa
AA seq
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MDITLFSPKDTLTHFFPSHQQSNDQVAAIDMQSNSSNNNNNQPQTSHTSTSRSSDSGEAC
GGGNKWASKLLSECARAISEKDSSKIHHLLWMLNELASPYGDCDQKLASYFLQALFCKAT
ESGQRCFKTLTTVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALDGESKLHI
IDISNTLCTQWPTLLEALATRNDETPRLKLTVVVTASIVRSVMKEIGQRMEKFARLMGVP
FEFKVISVLNHIGELTKEGLGVQEDEAVAINCIGALRRVEVDERSSVIQLFRSLNPRVVT
IVEEEADFTSSRYDFVKCFEECLRYYTLYFEMLEESFVPTSNERLMLERECSRNIVRVLA
CDEETGGGECERRERGVQWSERLREAFSPVGFSDDVVDDVKALLKRYKAGWALVLPQGDH
ESGIYLTWKEEPVVWASAWKP
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggacataactctcttcagtccaaaagacacactgacacacttctttccttcccaccag
caaagcaatgatcaagtagcagctatagacatgcaaagcaatagcagcaacaacaacaat
aatcagcctcaaaccagccatacatcaacaagccggtcttcggactccggtgaggcctgt
ggaggaggaaacaagtgggcatcaaagcttcttagtgagtgtgcaagagcaatctcagag
aaggactctagcaagatccaccaccttctatggatgttaaatgagcttgcctctccttat
ggagattgtgatcagaaattggcatcttatttcttgcaagctctattctgtaaggctacc
gagtctggtcaacggtgtttcaaaaccctaacaacagtagctgaaaagagccactccttt
gattcagctaggaaattgatactaaaattccaagaggtaagcccgtggactactttcggt
catgtagcttcaaatggtgcaattttggaggccttagatggggaaagcaaacttcacata
attgatatcagcaataccctttgcacacagtggcctactttgctagaagctttagccaca
agaaatgatgagacgccgcgattaaagctcaccgttgtggtaactgctagcattgtaaga
tcagtcatgaaagaaattggccaaagaatggagaagtttgctaggttaatgggagtgccc
tttgagtttaaagtaattagtgtgctaaatcatataggagagctcacaaaggaaggactg
ggtgttcaagaagatgaagcagtcgcgattaattgcattggggcattgagaagagttgaa
gtagatgaaagaagttctgtaatccagttgttccgatcacttaaccctcgagttgtgaca
attgtagaggaagaagctgattttactagctcaagatatgacttcgtcaagtgctttgaa
gagtgcctgaggtattatacactatattttgagatgctagaggagagctttgtcccaact
agtaatgagagattgatgttggagagggaatgttcaaggaacatagttagggttttggct
tgtgatgaagaaactggtggaggagagtgtgaaagaagagagcggggtgtccaatggtct
gaaaggctaagggaggcattttcccctgttggattcagtgatgatgttgtcgatgatgtc
aaggcattgcttaagagatacaaagctgggtgggcacttgtgctacctcaaggagatcat
gagtcaggaatttacctaacatggaaagaggaacctgtagtatgggcttctgcatggaaa
ccctaa
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