Populus trichocarpa (black cottonwood): 18107058
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Entry
18107058 CDS
T01077
Name
(RefSeq) bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic isoform X2
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00740
Riboflavin metabolism
pop00790
Folate biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01240
Biosynthesis of cofactors
Module
pop_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
18107058
00790 Folate biosynthesis
18107058
Enzymes [BR:
pop01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
18107058
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
18107058
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GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-GeneID:
18107058
NCBI-ProteinID:
XP_006373044
UniProt:
U5FLL6
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Position
17:complement(3559814..3565033)
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AA seq
524 aa
AA seq
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MASFNVSSCPSTTTRAARSGSQNFRLFNGLHGVNSFSANGNALNLALIRLDGSKSSFGIK
GVSKTRATLISGDELLSYSNDNGVVAKSALLDNGSVGVDLQPEAVAFGALSADNAFITND
FSIGNDDRQLDCPSEGFSSIPDAIEDIRRGKIVVVVDDEDRENEGDLIMAAELATPEAMA
FIVKHGTGIVCASMKGEDLDRLQLPLMVRQNENDEKLRTAFTVTVDAKHGTTTGVSANDR
ATTVLALASKDSKPDDFNRPGHIFPLRYREGGVLKRAGHTEASVDLAVLAGLDPVAVLCE
VVDDDGSMARLPKLLQFAERENLKIISIADLIRYRRKTDKLVEYASAARIPTMWGPFTAH
CYKSILDGIEHVAMVKGDIGDGEDILVRVHSECLTGDIFGSARCECGNQLALAMQQIEAA
GRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDL
GVRTMKLMTNNPAKYIGLKGYGLAVAGRVPLLTPITKDSKRQQW
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttcaatgtttcttcttgcccttcaacaaccacaagagcagctcgctctggt
tcccagaacttcagattgttcaatggattacatggtgtgaattcattttctgcaaatggg
aatgcattgaatttggcattgatccggctggatggaagtaaatcatcttttggtattaag
ggtgttagcaaaactcgagccacgctgatatctggtgatgagctactgtcctattccaat
gacaatggtgttgttgcaaagagtgctcttcttgataatggttctgttggggttgactta
cagcctgaggcagtagcatttggagccctatcagcggataatgctttcatcactaatgat
ttttccattggtaatgatgaccgtcaattggattgcccctcagaagggttttcttccatc
cctgacgctattgaagatattcgccgaggaaagattgtagtggttgtagatgatgaagac
agagaaaatgaaggggatctcattatggcagcagagttggcaacacctgaagctatggcg
tttattgtaaagcatggcactggaatagtttgtgcgagcatgaaaggtgaagatctggac
aggttacagcttcctttgatggttaggcaaaatgaaaatgatgaaaaacttcgtacagct
ttcactgtgactgtggatgctaaacatggtacaacaactggggtttcggctaatgatagg
gcaacaacagtgttagctcttgcatccaaagattcaaagcctgacgatttcaaccgccca
ggccacatttttccattgaggtatagggagggtggtgttctgaaaagagctggacacaca
gaagcttctgttgatcttgccgttctagctggattggatcctgttgcagttctgtgtgag
gttgtagacgatgatggctccatggctagattaccgaagcttcttcaatttgcagagagg
gagaacttgaaaattatatctatagctgatttaatcaggtatagaaggaagacagataag
ttggtagaatatgcttctgctgctcggatacctacaatgtggggaccgttcacagctcat
tgttacaagtcaatcttggatggcattgagcatgttgcaatggttaagggtgacattgga
gatggggaggatattcttgtgagggtacattcagaatgcctcacaggagatatatttgga
tctgctagatgtgaatgtgggaatcagctggcacttgcaatgcagcagattgaagctgct
ggcagaggtgttttggtctatctccgcgggcacgaagggcgtggcattggtttgggtcat
aaactccgtgcatacaacctacaagatgatggacgtgataccgtggaggcaaatgaggag
ttggggctgcctgttgattcacgagaatatggcattggcgcccagatgttacgagatctg
ggtgtccgaacaatgaagttgatgacaaacaaccctgcaaagtacatcgggctcaagggt
tatggattggcagttgcaggaagagttccgctattaactcccatcacaaaggacagcaag
agacagcaatggtag
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