Populus trichocarpa (black cottonwood): 18107066
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Entry
18107066 CDS
T01077
Name
(RefSeq) metacaspase-1 isoform X1
KO
K22684
metacaspase-1 [EC:3.4.22.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18107066
Peptidases and inhibitors [BR:
pop01002
]
Cysteine peptidases
Family C14: caspase family
18107066
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GFIT
Motif
Pfam:
Peptidase_C14
Zn_ribbon_19
Zn_ribbon_FGT1_2
Zn_ribbon_FGT1_1
Zn_Tnp_IS91
DUF7564
DZR
HypA
Motif
Other DBs
NCBI-GeneID:
18107066
NCBI-ProteinID:
XP_024444597
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Position
17:3985823..3988608
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AA seq
373 aa
AA seq
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MMDTRSQCYRCGQRFSVPPNTATIMCPSCKFETKTQSFERLKSQDGGQISFRSFIETART
KLSRSGTGSSKSNKSLNCKPSTLLFSESLSGLRPCRKRALLIGVTYKNSKQKLKGTIIDV
KGFRGLLMDTFTFPEEDIRVLTEEEPEPDFVPTKKNIQNSFKWLVEDCMAGDSLVFYFSG
HGVRQFDFDSDESDGFDETICPVDFVEVGTITDDEIKSAIVRPLKKGVTLNAIVDACHSG
TVLDLPYVYNRKAKKWEISKRLSEDEKHTDRGLAISIAACEDRQVAADTSSCIGKSSING
GAMTSVLIQIVKKNPTITYGKLLDSIHEDIEKANKEGCLPGILKRMLNNFLSQKPQLSAS
KEFNVNSRFLILQ
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgatggatactagaagccagtgctatagatgcgggcaacggttctcagtaccaccaaat
actgcaacaattatgtgccccagttgtaagtttgaaactaaaacccagtcatttgaacga
ttgaagagccaagatggaggtcagatttccttcagaagtttcattgaaacagcaaggact
aagttatctcgcagtggcactggtagctcaaaatctaacaagtcattgaattgtaaaccc
tccactttgcttttctccgaatctttatctggcttaagaccatgcaggaagcgtgcacta
cttatcggagtgacttataagaactcgaagcaaaagctcaagggaactatcattgatgtg
aagggtttcagaggtttgttgatggatacttttacgttcccggaagaggacattcgtgtt
ctcacagaggaggagccggagccagattttgtcccaacaaagaagaatatacagaattcc
ttcaaatggctcgtggaggactgcatggctggtgattccttggtgttctacttctcagga
cacggcgtaagacaatttgattttgatagcgatgagagcgatgggttcgatgaaactatc
tgccctgttgattttgtggaagtaggcacgatcacagatgatgaaattaagtctgccatt
gttaggccgctcaaaaagggtgttacgcttaacgcaattgtggatgcttgtcatagtgga
actgttcttgatctgccatatgtgtataacagaaaagcgaaaaaatgggaaatcagcaag
cgtctatctgaagatgagaaacatacagatcgtggactggcaatttcaatcgctgcatgt
gaagatagacaagttgctgcagatacttcttcttgcattggaaagtcatcgataaatggt
ggtgccatgaccagcgttttgatacaaattgtgaagaagaaccctacaataacatatggt
aaactgctagactccattcatgaggacattgaaaaggctaacaaagaaggatgtcttcct
gggatcttaaaaagaatgttaaataactttttatcacagaagcctcaactttctgcttcc
aaggagttcaacgttaacagcagatttcttattttgcaataa
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