Populus trichocarpa (black cottonwood): 18107097
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Entry
18107097 CDS
T01077
Name
(RefSeq) 3'-5' exonuclease
KO
K22807
werner syndrome-like exonuclease [EC:3.1.11.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pop03400
]
18107097
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
18107097
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Topoisom_I
SR-25
Motif
Other DBs
NCBI-GeneID:
18107097
NCBI-ProteinID:
XP_024445085
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Position
17:complement(4785515..4789879)
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AA seq
323 aa
AA seq
DB search
MNSRQHETNNNSKISWSPILDWDQPLTDQELEAIDAIEASFQSSTPSSSSSSSSSTPAAT
TPSSSIINKRHSSPQKDQEPPKTRRQLPNSIFSLSKPFSLSPCQGNVKMRYPAMKFGGQI
LYSRTSIEVEKAARELLQSLEAEKREMDRVIIGFDIEWKPSFTTGVLPGKAAVMQICANT
SLCHVMHIFHSGITPSLQFLLEDSKLVKVGIGIGGDCAKVFRDYNASVKSVEDLSYLANQ
KLDGKPKTWGLQALAKILVCKELQKPNKIRLGNWQVDVLSKEQLQYAATDAFASWQLYQV
LKSLPDAKDATDSTSKELKVEST
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgaattccagacaacacgagactaacaacaacagcaaaataagttggagtccaatccta
gattgggaccagcctctgacagaccaagaacttgaagccattgatgcaatcgaagcctca
tttcaatcctccacaccatcttcatcttcatcttcatcatcatcaactcctgctgcaaca
actccttcctcttctataatcaacaaacgacattcaagtccacaaaaggatcaagaacct
ccaaaaacccgacgccaattgcccaattctattttctctctctccaaacctttttctctt
tctccttgtcaaggtaatgtgaagatgagatacccggcaatgaagtttgggggtcaaatt
ttgtatagcagaacttctatagaggtagaaaaagctgcaagggagcttttacagagtctt
gaagctgaaaagagagaaatggatcgagttatcattggttttgatattgagtggaagccc
tcatttacaacaggtgtgttgcctggaaaggctgcagttatgcagatatgtgcgaacact
agtctttgtcatgtgatgcatatttttcattctggaatcactccaagcctgcagtttctt
ctagaggattctaaacttgtaaaagttggaattggcataggtggtgactgtgctaaggtt
ttcagagattataatgcctcagttaaatcagtggaggacctttcttatcttgcaaatcaa
aagcttgatggaaaacctaaaacttggggtcttcaagctctggcaaagattcttgtttgc
aaagagcttcaaaagcccaacaaaatcagacttggaaactggcaagttgatgttctatca
aaagaacaactacaatatgctgctactgatgcttttgcttcttggcaactataccaagtg
ttaaagagcctcccagatgcaaaggatgctactgactctacaagtaaggaactgaaagtt
gaatcaacataa
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