Populus trichocarpa (black cottonwood): 18107123
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Entry
18107123 CDS
T01077
Name
(RefSeq) protein AUXIN SIGNALING F-BOX 2
KO
K27740
protein auxin signaling F-box 2/3
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18107123
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Motif
Pfam:
Transp_inhibit
F-box_5
LRR_6
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
Dit_like
Motif
Other DBs
NCBI-GeneID:
18107123
NCBI-ProteinID:
XP_006373115
UniProt:
B9N0V8
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Position
17:5095063..5098650
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AA seq
571 aa
AA seq
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MNYFPDEVLEHIFDFVTSQRDRNSVSQVCKPWYKIESSSRQKVFVGNCYAISPQRVIERF
PGLKSITLKGKPHFADFNLVPNDWGGFVYPWIEAFARNSVGLEELKLKRMIISDECLELI
SRSFPNFKSLVLVSCEGFTADGLAAIASNCRFLRELDLQENDVEDHRGHWLSCFPDTCTS
LVSLNFACLKGEVNVAALERLIARSPNLRSLRLNHAVPLDVLQKILIRAPHLVDLGVGSY
VNDPDSETYNKLVMAIQKCMSVKSLSGFLEVAPHCLSAFHLICPNLTSLNLSYAPGIHGA
ELIKLIRHCMKLQRLWILDCIGDQGLEVVASTCKDLQEIRVFPSDPHVGNAAVTEVGLVA
LSSGCRKLHSILYFCQQMTNVALITVAKNCPNFTRFRLCILDPTKPDAVTNQPLDEGFGA
IVHSCKGLRRLSMTGLLTDKVFLYIGMYAEQLEMLSIAFAGDTDKGMQYLLNGCKKLRKL
EIRDCPFGNAALLMDVGKYETMRSLWMSSCEVTLGGCKSLAKKMPRLNVEIINENDQMDA
SADDRQKVEKMFLYRTLAGRREDAPEFVWTL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaattatttcccagatgaagtattagagcatattttcgattttgtaacatcacaaaga
gacaggaactcagtttctcaagtatgtaaaccatggtacaagatcgaaagtagtagcagg
cagaaggtttttgtagggaattgttatgcaattagtcctcagagagtgattgagaggttt
cctggtttaaaatctattactttgaaaggaaagcctcattttgctgattttaatttggtt
ccaaatgattggggaggctttgtttatccatggattgaagcttttgcaaggaatagtgtg
gggttagaggagctcaagttgaagaggatgataatatccgatgagtgcttggagctcatt
tcaaggtcttttcccaatttcaagtccttggttcttgttagttgtgaaggcttcactgct
gatggccttgctgctattgcttctaattgtaggtttcttagggagctggacctgcaagaa
aacgatgttgaagatcatagaggccattggcttagctgctttcctgatacctgtacatct
cttgtatcacttaattttgcatgtctcaaaggtgaggtcaatgtagcagcacttgagaga
cttatagcaagatctcctaatctgaggagtttgaggttaaatcatgcagtgccacttgat
gtacttcaaaaaatattgatccgagcacctcatttagtggacttgggtgtagggtcttat
gtaaatgatccagattctgagacctataataaattagtgatggctattcaaaagtgtatg
tcagtcaagagtttgtcaggatttctggaggttgctccccactgcctatcagcttttcac
ttaatttgcccgaacttgacttccttgaacttaagttatgctccaggaattcatggtgct
gagctcataaagctaattcgccactgcatgaaactccagcgcttatggatactggactgc
attggagaccaaggactagaagttgttgcttccacttgcaaggatttgcaggaaataagg
gtctttccttctgatccacacgttgggaatgcagctgtgacagaagtgggcttggtcgct
ctttctagtggttgccgtaagctccactcaattctatacttctgtcagcagatgaccaat
gtagccctcattactgtagctaagaactgccccaactttacccgcttccggttgtgcatc
cttgaccccacaaaaccagacgctgtgaccaatcagccattggatgaaggttttggggct
attgttcattcatgcaagggtctcaggcggttgtcaatgactggcctgctgactgataaa
gttttcctctacattggaatgtatgccgagcagcttgaaatgctttctattgcatttgct
ggggacactgacaagggaatgcagtatctgttgaatggttgcaaaaagcttcgcaagcta
gagataagggactgcccttttggtaatgcagcgcttttaatggacgtgggaaagtatgaa
acaatgcgatccctttggatgtcatcgtgcgaagttacccttggaggctgcaagtccctt
gcgaagaagatgccaaggctcaatgtggagatcattaatgaaaatgatcagatggatgct
agtgctgatgataggcaaaaggtagagaagatgttcctatatcggactttggcggggcga
agggaagatgcaccagagttcgtttggactttatag
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