Populus trichocarpa (black cottonwood): 18107187
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Entry
18107187 CDS
T01077
Name
(RefSeq) glutamate receptor 2.8 isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18107187
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
18107187
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
18107187
NCBI-ProteinID:
XP_024445286
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Position
18:complement(777678..850751)
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AA seq
981 aa
AA seq
DB search
MIMRKKYPSKPALSFFSLLFLRIFFFEMGMAKNSTSIIPMNVGVVLDFDNDLDGKIGLSC
INMSLSDFYDTHGDYKTRLVLITRDSKNDVAGAAAAALDLIKNVEVQAIIGPTTSMQANF
VIELGDKAQVPILSFSASSPSLTSIRSPFFFRATQNDSTQVNAISALVQAFGWREAVPIY
IDNEYGQGVIPYLTDALQAVDARVPYRSVISPSATDDQIVSELYKLMTMQTRVFIVHMFP
SLGARVFAKAKEIGMVSEGYVWIMTDGLTAEFFSSPKASVTNTMQGALGVKPYVPRTKDL
ETFRIRWKRKFQQDNPDIVDADLNIFGLWAYDAVTALALAVEKAGTANLGFQKANVSSNS
STDLATLGVSLNGPNLVQALSNITFKGLTGDYLFDNGQLQSSAFQIINVNGNGGREIGFW
TSTKGIVKTLNSTNNMTAYSGSNSDLSTVIWPGDTTSVPKGWEIPTNGKKLRIGVPVKDG
FSEFVKVKRDPSSNTSTVTGYSIDVFDSVVKALPYALPYEYIPFAKPDGEPAGTYDDLIY
QVYLKNFDAVVGDTTIVFNRSQYVDFTLPYTESGVSMIVPIVDNNSKNAWVFLRPLTWDL
WVTSVCFFIFIGFVIWVLEHRINEDFRGPASHQAGTSFWFSFSTMVFAQRETVVSNLSRA
VVIIWCFVVLILTQSYTASLTSLLTVQQLRPTVTDVHELIKKGEYVGYQEGSFVLGILLN
LGFDKSKLIVYNSTEQCDDLLSKGSVNGGIAAAFDEVPYTRLFLSKYCSKYAMIDPTFKT
AGFGFAFPKGSPLVPDVSRAVLNMTEGDKMKEIENAWFGKQSNCPDSSNSVTSNSLSLKS
FWGLFLIAGVASLLAIIIFMVMFVYKERKMFRPLNSRISVRSKVRNFFRIFIQRDLKSHT
FRKSGLNDSKGTNLPSMGEPSPSAYSVQTISFPGDGDQSSTKSVGSSPDCQTSQEVVINI
DQLTNPNQERLAAFEVEHDHN
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgaggaaaaagtacccttcaaagcctgctctctctttcttttcccttcttttt
ttgaggattttcttctttgaaatgggaatggccaagaactcaacatctataatcccaatg
aatgtaggtgtggttcttgacttcgacaatgacttggatggcaagattgggttgagttgc
atcaatatgtctctttcagacttctatgatactcatggtgattacaaaaccaggctggtc
ctcatcaccagggactccaagaacgatgttgctggtgcagctgctgcagccctggacctg
ataaaaaatgttgaagtgcaagcaatcataggcccaactacatcaatgcaagccaatttt
gttattgaacttggagataaagctcaggtgcccattttatcattttctgcatcaagtcct
tctctcacttccatcaggagtcccttcttcttccgagctacccaaaatgactcaactcag
gtgaatgctataagtgcattagttcaagcctttggatggagagaagcagtacccatctac
attgacaatgagtatggacagggagtgataccttatttaactgatgctctccaagcagtt
gatgctcgtgtaccgtacaggagcgtcatttctccatcagccactgatgatcaaattgtt
tcagagctttacaagttgatgacaatgcaaactagagttttcattgtgcacatgtttcca
tctcttggcgctcgggtttttgccaaagcaaaagagattggcatggtgagtgaaggctat
gtttggatcatgactgatggtctaacagctgaattttttagttcaccaaaagcttctgtc
actaatacaatgcaaggtgcattgggtgtgaaaccttatgtgccaagaacaaaagatctc
gaaacttttcgaattcggtggaaaagaaaattccaacaagataatccagatattgttgat
gctgatttgaatatttttggcttatgggcatatgatgcagtaacagctttggccttggca
gttgagaaagctggaactgcaaatttaggcttccaaaaggcaaacgtttctagcaattca
tccacagatcttgcaactcttggggtgtctttaaatggtccaaacctcgttcaagcttta
tcaaacattactttcaaaggtcttacgggagattatcttttcgataatggacagttacag
tcatcagctttccagataataaatgtgaatggcaatgggggaagagagataggattctgg
acatcaaccaaagggattgtcaaaacattgaactcaacaaataatatgactgcgtactca
ggttctaactccgatctttcaactgtcatatggccgggtgatacaacttctgttcccaag
ggctgggagatcccaacgaatggaaagaagttgagaataggagtgcctgtgaaggatggt
ttcagtgagtttgtgaaagtaaaaagagatcctagttctaacacctcaaccgtcactgga
tacagcatagatgtttttgattctgttgtcaaagcattgccttatgctttgccttacgag
tacatcccctttgcaaagcctgacggcgagccagctggaacttacgatgatctgatatat
caagtgtacttgaagaattttgatgctgtagttggagatacaactattgttttcaacaga
tcccagtatgttgattttactttgccttacactgaaagtggtgtctccatgatcgtccct
attgtggacaacaacagcaaaaatgcatgggttttcttgaggcctctgacatgggatctc
tgggtgacaagtgtttgtttctttattttcattggatttgtgatctgggttcttgaacac
agaatcaatgaagattttagagggcctgcttcgcatcaagcgggcactagcttctggttt
tctttctcaaccatggtttttgcacaaagggagacagttgttagcaacttgtctagagca
gtggtaatcatatggtgttttgttgtgctgattctcacacaaagctacactgccagtcta
actagtttacttacagtccagcaactgcggcctacagttactgatgtacacgagctcatt
aagaagggggagtatgtaggctaccaggagggttcttttgttctgggaatcctattaaac
ttgggtttcgacaagtccaagctcattgtgtataattccacagaacaatgtgatgacctt
ctatcgaaaggaagtgtaaatggtggtattgctgctgcttttgatgaagtaccatatacg
aggctctttctgtcgaagtattgctctaaatatgccatgattgatcctacatttaaaaca
gccggtttcggatttgccttccctaaaggttctcctctggtaccagatgtatcaagggca
gttctaaacatgacagagggagataaaatgaaggaaatcgagaatgcttggtttggaaaa
caaagcaattgtccagattccagcaactcggttacatctaacagccttagtctcaagagt
ttctggggcttatttttaattgctggagtagcatccctcttagctatcattatattcatg
gtcatgtttgtctacaaggaaaggaaaatgtttaggcctttaaattccagaatttccgta
aggagtaaagtccgcaatttcttcaggatctttattcagagggacttaaaatcccatact
ttcagaaaaagtgggctgaatgacagcaagggcactaatctgcctagtatgggtgagccg
agcccatcagcctattcagttcaaactatttctttccctggagatggagatcagtcttct
acaaagtctgttggttccagtccagattgtcaaacatctcaagaggtagtaataaatatt
gatcaacttacaaacccaaatcaagaaagactagcagcttttgaagtagaacatgatcac
aattga
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