Populus trichocarpa (black cottonwood): 18107260
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Entry
18107260 CDS
T01077
Name
(RefSeq) protein DELETION OF SUV3 SUPPRESSOR 1(I)
KO
K10881
26 proteasome complex subunit DSS1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03050
Proteasome
pop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
18107260
09124 Replication and repair
03440 Homologous recombination
18107260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18107260
04131 Membrane trafficking [BR:
pop04131
]
18107260
03051 Proteasome [BR:
pop03051
]
18107260
03400 DNA repair and recombination proteins [BR:
pop03400
]
18107260
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
18107260
Membrane trafficking [BR:
pop04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
18107260
Proteasome [BR:
pop03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
18107260
DNA repair and recombination proteins [BR:
pop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
18107260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSS1_SEM1
Motif
Other DBs
NCBI-GeneID:
18107260
NCBI-ProteinID:
XP_024444384
LinkDB
All DBs
Position
17:6708576..6709949
Genome browser
AA seq
73 aa
AA seq
DB search
MATETKPATEDVKIDLFEDDDEFEEFEINGEWEVKEEGKDATQQWEDDWDDDDVNDDFSL
QLRKELENNTQKN
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaaacgaaaccagcaactgaggatgtgaagattgacttgttcgaggacgac
gatgaatttgaagaatttgaaatcaatggagagtgggaagtgaaggaggaagggaaagac
gcgacacagcagtgggaggatgattgggatgatgatgatgtcaatgacgacttctcactg
cagctaaggaaggaattggagaacaatacacagaagaactga
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