Populus trichocarpa (black cottonwood): 18107361
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Entry
18107361 CDS
T01077
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
18107361
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
18107361
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
18107361
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
18107361
NCBI-ProteinID:
XP_006373415
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All DBs
Position
17:11268839..11272682
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AA seq
504 aa
AA seq
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MLKMWKTEDSVEEWEMKVKLFGGGKVDKLKTSVVSRSSMKLWMIRAITTVLLWTCVVHLL
ALGEIWGPRLLKSWPSCFSNQDAELTSVPAKLVLPPKRIYKNNGYLMVSCNGGLNQMRAA
ICDMVAIARYLNVTLVVPELDKSSFWNDPSEFQDIFDVDHFITSLRDEVRILKELPPRLK
TRVKLGLFYSLPPVSWSNISYYTHQILPLLQKYKVVHLNKTDARLANNGLPIEIQKLRCR
VNFNALKFTSQIEELGRRVVRILRERGPFLVLHLRYEMDMLAFSGCTHGCNDEETEQLTR
MRYAYPWWKEKDISSEMKRKEGLCPLTPEETALVLSALGIDRNVQIYVAAGEIYGGKRRM
EALASAFPNLVRKETLLGPSDLKFFQNHSSQMAALDYLVSLESDIFVPTYNGNMAKVVEG
HRRFLGFKKTISLDRKLLVGLIDQYNKGSLSWDEFSSTVKEAHADRMGSPKARVVIPDKP
KEEDYFYANPQECLQLLDEPLRSS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaatgtggaagactgaggactctgttgaggaatgggagatgaaagtgaagtta
ttcggtggtggaaaggttgacaagttaaaaacttctgtggtttcaaggtcttcaatgaag
ctgtggatgataagggcaatcacaactgtcttgttatggacttgcgtggtccatttactg
gccttgggagagatttgggggccgagattgttaaagagttggccttcttgttttagtaat
caagatgctgagctaacttctgttcctgccaaacttgttctgcctccgaagagaatctac
aagaataatggatatctcatggtttcctgcaatggaggactcaaccaaatgcgagcagca
atatgtgacatggtcgctattgcaagatatctaaatgttactcttgttgtcccagagttg
gataaatcctcattttggaatgacccaagtgagtttcaagacatatttgatgttgatcat
ttcatcacttccttgagggatgaagttcgtatattgaaagagctaccgcctaggcttaaa
acacgagtaaaattgggattgttctactcattacctcctgttagctggtcaaacatttct
tactacacccatcagattcttcctctactgcaaaagtacaaagttgtacatttgaacaag
acagatgctcgtcttgcaaataatggacttcctattgagattcaaaagttgcgctgccgt
gtaaattttaatgctttgaagtttacatcacagatagaagaactaggtagaagggttgtt
aggatattgagggagagaggccctttcctggtgcttcatctcagatatgaaatggacatg
ttggctttctctggctgcactcacggttgcaatgatgaggaaacagaacaactgacaaga
atgagatatgcttatccctggtggaaggaaaaagatattagttctgaaatgaaaaggaaa
gaaggtttgtgtcctttgacacctgaggaaactgcccttgtgttaagtgcacttggaatt
gaccgtaatgttcaaatttatgttgctgctggagaaatatatggtggaaaaagaaggatg
gaggctttggcatccgcttttcctaatttggtcaggaaagaaactctgttgggaccatca
gatttgaagtttttccagaatcattcatctcaaatggcagcactagattatctggtgtcc
ttggagagtgacatatttgttcctacatataatggcaatatggctaaagttgttgaaggt
catcgcagattcttaggattcaagaagactatttcattggacagaaagcttctggttggt
ttaattgatcaatacaacaaaggctcattgagctgggatgaattctcttctactgtgaag
gaagctcatgctgatcggatgggtagtccaaaggcgcgggttgttataccagataaacca
aaggaagaagattatttctatgccaatccacaagagtgtttgcaactgttagatgaacca
ttgagaagttcatga
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