Populus trichocarpa (black cottonwood): 18107426
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Entry
18107426 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18107426
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00260
Glycine, serine and threonine metabolism
pop00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
pop01230
Biosynthesis of amino acids
Module
pop_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
18107426
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
18107426
Enzymes [BR:
pop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
18107426
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Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
18107426
NCBI-ProteinID:
XP_006373489
UniProt:
U5FMX8
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Position
17:11755745..11759141
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AA seq
505 aa
AA seq
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MAIQATFIADPVLISSPSRISIRGWEQCIGSFVLKTRPRHPRLSNGGRVRARASLNADLK
AVGIPHQWYNVVADLSVKPPPPLHPKTFEPVKPEDLSPLFPDELIRQEASTDKFIDIPEE
VLDIYSLWRPTPLIRAKRLEKLLDTPARIYYKYEGGSPAGSHKPNTAVPQVFYNAQQGIK
NVVTETGAGQWGCSLAFACSLFGLDCEVWQVRASYDQKPYRRLMMETWGAKVHPSPSSIT
ETGRRILQMDPSSPGSLGIAISEAVEVAAKNADTKYCLGSVLNHVLLHQTVIGEECIKQM
EAIGETPDVIIGCTGGGSNFAGLSFPFIREKLNGKINPVIKAVEPAACPSLTKGVYAYDY
GDTAGMTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYELGFMEAMAIPQIECFRG
AIQFARSEGLIPAPEPTHAIAATIREALHCKETGEAKVILMAMCGHGHFDLKSYEKYLQG
KMVDLSFDEEKIRASLDKVPQVTRN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccattcaagcaactttcatagcagatccagttctcatttcaagcccatcaagaatc
tccatcagaggttgggagcaatgtattgggtcttttgtgttgaaaacgaggcctaggcat
ccgaggctttcaaatggaggcagagtcagagcaagagcttctctgaatgctgatttgaaa
gcggttggcattcctcatcagtggtacaatgttgttgcagatctttcagtgaaacctcct
cccccactgcatcctaaaacatttgaaccagtcaaacctgaagatttatctcctctattt
cctgatgagttgattaggcaggaggcaagcactgacaagttcatagatatcccggaagaa
gttcttgatatttacagtctctggcgcccaactccattgatcagagcaaagaggttggaa
aagcttctcgatacacctgccagaatttactacaagtatgaaggtggcagtccagccgga
tcccataaacccaacactgcagtcccacaagttttttacaatgcgcagcaaggcatcaag
aatgttgtgacagaaactggtgctggccaatggggatgttcattggcctttgcgtgcagc
ttatttggtcttgactgtgaggtgtggcaggttcgcgcttcttatgatcagaaaccatat
cgtagattaatgatggagacctggggtgcaaaggtacacccatctccatcaagcattacc
gagactggtaggagaattctccagatggatccgtcaagtccaggaagtttaggaatagct
atatcagaagctgtagaggttgcagctaaaaatgctgacaccaagtactgcttggggagt
gtgctgaatcatgttttgttgcatcagacagtcataggtgaggagtgcataaaacaaatg
gaggctattggtgaaacccctgatgtgataataggatgtactggtggagggtccaatttt
gcaggactcagtttcccattcatccgagagaagctcaatgggaaaatcaaccctgtcata
aaagctgttgaacctgcagcatgtccttcactgacaaaaggtgtatacgcatatgattat
ggagatacagcaggaatgactccattaatgaagatgcacactctaggacatgacttcatt
cctgaccctattcatgctggtggattgcgttaccatggcatggctccattaatttctcat
gtgtatgaactgggtttcatggaagcaatggcaatccctcagatcgagtgctttcgaggt
gccatacaatttgctcggtcggaaggactgataccagcaccggagccaactcatgcaatc
gctgctaccataagggaagcactgcattgtaaagagactggagaagcaaaggttattctc
atggcaatgtgtggacatggccattttgacctgaaatcttatgagaagtatttgcaagga
aagatggttgacttgtcattcgatgaggagaaaataagagcatcattggacaaagttcct
caggtgacaagaaattga
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