Populus trichocarpa (black cottonwood): 18107451
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Entry
18107451 CDS
T01077
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
18107451
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
18107451
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
18107451
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Structural polysaccharide
18107451
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
18107451
NCBI-ProteinID:
XP_024445102
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Position
17:11601928..11606407
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AA seq
558 aa
AA seq
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MAVAVRGIRGGGSGGINGGLRAFFSHRIFISATFTLLFLATLSALFSPHPHHHPSLPSSG
NAYVQRTFLAIKSDPLKTRLDLIYKQANDHMTLVNAYAAYARKLKLDISRQLRMFDELDK
NLTDLPLKPSYKSSLFEPGSDVDEDVLRQFEKEVKEKVKVARLMIAEAKESYDNQIKIQK
LKDTIFAVNELLIKAKKNGAFASLISAKSVPKSLHCLAMRLVGERIAHPEKYKEEGYKAE
FEDPSLYHYAIFSDNVIAVSVVIRSVVKNAEEPWKHVFHVVTDKMNVAAMKVWFRMRPVE
GGAHVEINAVEDFSFLNSSYVPVLKQLESAKMQKFYFDNQAENATKDGSNMKFRNPKYMS
MLNHLRFYLPEMYPKLHKILFLDDDVVVQKDLTGLWKVDLDGKVNGAVETCFGSFHRYAQ
YLNFSHPLIKERFNPKACAWAFGMNIFDLDAWRREKCTEHYHYWQSLNEDRTLWKLGTLP
PGLITFYSTTKSLDKSWHVLGLGYNPSISMDEISNAAVIHYNGNMKPWLDIAMNQYKNLW
TKYVDNDMEFVQMCNFGL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtccgaggaatccgagggggaggcagcggcggcatcaatggtggatta
cgtgcctttttctctcaccggatcttcatctccgccacgttcactcttctattcctcgcc
actctctctgctctcttctcccctcaccctcaccaccacccctcactgcctagtagcgga
aatgcttacgtgcaacgcacttttttggcgatcaaatcagatccgttgaaaacacgatta
gatttgatatataagcaagcaaatgatcacatgacgttagttaatgcatacgccgcgtat
gcgagaaagctgaagcttgatatttctaggcagttaagaatgtttgatgaattagataag
aatttaacggatttaccgctgaaaccgagttataaatcctcgcttttcgagccgggtagt
gatgtagatgaggatgttttgaggcaatttgagaaggaagtaaaggagaaagtgaaagtt
gcgaggttaatgattgcggaagcgaaggagagttatgataatcagataaagattcagaag
ttgaaggatacaatttttgctgttaatgagttgttgatcaaggcgaagaagaatggagcg
tttgcgagcttgatttctgccaagtcggtgccgaagagtttgcattgtttggcaatgagg
cttgtgggggagaggattgcccatccggagaagtacaaggaggaagggtataaggcggag
tttgaggatccgagtttgtatcattatgcgattttttcggataatgtgatcgcggtttcg
gttgtgattaggtctgtggtgaagaatgcggaggagccttggaaacatgtttttcatgtg
gttacggataagatgaatgttgcagctatgaaggtttggtttaggatgcggcctgtggaa
ggtggtgcgcatgtggagattaacgctgtggaggactttagttttctgaattcatcgtat
gtgccggttttgaagcagcttgagagcgctaaaatgcagaagttttattttgataatcag
gcagagaatgctaccaaagatgggagtaatatgaagtttaggaaccctaaatatatgtca
atgttgaatcatcttcggttttatttgcctgagatgtatcctaagctgcataagattctg
tttttggacgatgatgttgttgttcagaaggatttgactgggttgtggaaggttgatctg
gatggtaaggtgaatggagctgttgagacttgcttcgggtcatttcatcgttatgcacag
tatctgaacttttcacatcctttgattaaggagaggttcaaccccaaggcttgtgcttgg
gcttttgggatgaatatatttgatcttgatgcttggaggcgtgagaaatgcacagagcac
tatcattattggcagagcctgaatgaggatcgtactctttggaaattgggtactctccca
cctggcttgattaccttctactccacgacgaagtcactggacaaatcctggcatgtgctt
ggtctcggatataatccaagtattagcatggatgagatcagcaacgctgctgtcattcat
tacaatggaaacatgaaaccatggcttgacattgctatgaaccaatacaagaatctctgg
actaaatatgtagacaatgatatggaatttgttcagatgtgcaattttggtctttag
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