Populus trichocarpa (black cottonwood): 18107455
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Entry
18107455 CDS
T01077
Name
(RefSeq) disease resistance protein RPM1
KO
K13457
disease resistance protein RPM1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
18107455
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GFIT
Motif
Pfam:
LRR_14
NB-ARC
WH_DRP
LRR_4
AAA_16
LRR_8
Rx_N
LRR_R13L1-DRL21
AAA_22
LRR_1
NACHT
NTPase_1
NPHP3_N
ATPase_2
GCH_III
LRR_Zer-1
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
18107455
NCBI-ProteinID:
XP_006373524
LinkDB
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Position
17:complement(11577955..11582017)
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AA seq
908 aa
AA seq
DB search
MAEVAVEYLVRKLKDRILFETDRRSAAELNSIKIEFEKLRPFLKNADWRKMMVADNTIVK
WVTDVINLVYEIEDVVDKDCIGRKESYGSLSSLVDFVSEFFNYGTTSNKPQTSYKSLLVH
VSDRIKELEATRKHLSLLGDITKAKHENLIQHSKSSHKLPLTNMIGRSKEFMMLKELLLH
VVEADRPYLVAVTGNEGVGKTTLVLRVYESVQRHFDCSAWISVCGRSITGILRNMATDFS
RSHSVMKLVSNLDKKGDKDLANMICDYLGGKNFLLVLDGLDTLDTFEDIKRALPARCRGK
VVVTTCNSAIPAVICRHVLHLDPLLAEDGLRLLRGRALLQQYDLGEVPWPSSVKLVEKKI
LHICEGIPLSIATMGSLLSTINLEEVGNWNEVLHMLEEANQCMPQSNLIKKVITVCYFSL
PAMLKCCFLYCGMFPRHCDIQCKRLIRLWVAEGFTGRQLFGITEEESAKYLLEELIQRNL
LQVARVGVNGEVESCTLLQPVHDFICDMSQKDQIFSVYESTQQVWPLKASRFVAIQGEID
NRTPNSLPREIRSLHFFGGRPNQMAILLNLVLKVKLLHVLDLQNIPIDTLPDEIGDLVEL
RYLDLRNTRLHELPPSLQNLCELQTLDVRNTPVRALPSGFDSLKMLKHLLLADSYGNRVV
KLDAEIMFLKDLQTLAGVKLTQNVAVGLNHLPKLLKLSVGEVEGGKNSLCLSESINQMKD
LSSLTIKCAWRKEIQIQISNPLENLEKLRVGGWIRDLLRWISRLSSLKYLHLWDCMLNQD
PISSLQHLPNLVVLSLSKAFKGKQISCDNIAGFPKLKRLSIFHFEELTEWTKIEEGSMEK
LQILTIGWCRKLKLPPRGLESLKDLETLQITSMYPEFAEEAKVISRCSGLNFSVVEQVAS
QTRQQNLT
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggtagcggtggagtaccttgttagaaaattgaaggatcgaattttatttgaa
actgacagacgaagtgcggcagaattaaatagcatcaagattgagtttgaaaaactcagg
ccatttctgaaaaatgcagattggagaaagatgatggtggctgacaacacaattgtgaaa
tgggtgacagatgtaataaacctggtgtatgagattgaagatgtcgttgacaaggattgc
attggaagaaaggagtcatatgggtctctgtcctcacttgttgattttgtgagtgaattt
tttaactatgggaccacatcaaataaaccgcagactagttacaagtcattgctggtgcat
gtctcagataggattaaagaactagaagccacaaggaagcatctaagcttgttaggagac
atcactaaagccaaacatgaaaacctgatacaacattcaaagtcctcccataagcttcca
ttgaccaatatgattggaaggagcaaagaatttatgatgctcaaggaattgcttcttcat
gtggtcgaggctgataggccatatcttgttgctgtaaccggaaatgaaggtgttggcaaa
acaacacttgtcctaagagtgtatgagagtgtgcagagacattttgactgttctgcctgg
atttctgtttgtgggcgttcaatcactggaattttaagaaacatggctacagatttttcc
agaagccattcagtaatgaagctggtgagtaatttggataaaaagggtgacaaggattta
gcaaacatgatctgtgactacttaggtggtaagaacttcttgctagtcttagatggctta
gataccttagatacctttgaagatattaagcgtgcattacccgctagatgcagagggaag
gtggtggtgacaacctgtaattcagcaattcctgcagttatatgcaggcatgttctccat
cttgatccactactggcagaagatggtctgaggcttcttcgcggacgagcactcttgcag
caatatgaccttggtgaggtgccttggccttcttcagtgaaattggttgaaaagaagatt
ttgcatatttgtgaaggcatccccctatcaattgccactatggggagcttgctttcaaca
atcaacctagaagaagttgggaattggaatgaggtccttcatatgctggaggaagctaat
cagtgtatgcctcagtccaatttgatcaagaaagtcatcacagtatgttactttagcctg
ccagcaatgctgaaatgctgcttcctttattgtggaatgtttccccgccattgtgacatc
caatgtaagaggctgattcggttatgggtggcagagggctttacaggaagacagctattt
gggataacagaagaggaatctgccaaatacctcttagaagagcttatccaaaggaatttg
cttcaagtggcacgtgtaggtgtaaatggggaggtggaatcttgtacactcctgcagcca
gtgcatgatttcatctgtgacatgtcacaaaaggaccagatattttctgtatatgagagc
acccagcaggtttggccattaaaggcatcacgttttgttgccatacaaggagaaattgat
aatagaacacctaattccctccctagagagatccgttctttgcatttctttggggggagg
ccaaaccagatggctatcttgttgaacttggtattgaaagttaaactcctgcatgtgctg
gatttgcaaaatattcctattgacaccttgcctgatgaaattggcgatcttgttgagttg
cgctatctagacctgaggaacacgaggctacatgagcttccaccatcccttcaaaatctg
tgtgagctacagacacttgatgttagaaacacaccggtaagggctttgcctagtggcttt
gatagcctcaagatgttgaagcaccttcttcttgccgattcatatggcaacagggtagtg
aagttggatgctgaaatcatgtttcttaaagacctccagacactagcaggtgtgaaactt
acacaaaatgtcgctgtaggactaaaccaccttcctaaacttctgaagctatcagtggga
gaggtagaaggtggaaaaaattctctttgtctgtcagaatccatcaatcagatgaaagac
ctcagttccctgaccataaaatgcgcttggaggaaggaaattcaaattcagatatcaaat
cctcttgagaatttggaaaagttacgtgttggaggttggattagagatttgctgaggtgg
ataagcaggctaagctccctcaagtatttgcatctatgggactgtatgttgaatcaagac
cccatctcaagcctccagcatttgcccaatcttgttgtcctttcattgtccaaggctttc
aaagggaagcagataagttgtgataatattgctggatttccgaagctcaagagactatca
atttttcactttgaagaattaactgaatggacaaagatagaggaaggatcaatggaaaag
cttcagattttaaccattggttggtgtcgtaaactaaaattgcctccaagaggccttgaa
agtcttaaggatcttgaaacactgcagataaccagcatgtatccagaatttgcagaagag
gcaaaagtgatctctcgttgttcaggcttaaacttttcagttgttgaacaagttgcttct
caaactcgtcaacagaatcttacctaa
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