Populus trichocarpa (black cottonwood): 18107522
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Entry
18107522 CDS
T01077
Name
(RefSeq) glutamate receptor 2.7 isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pop04040
]
18107522
Ion channels [BR:
pop04040
]
Ligand-gated channels
Glutamate (ionotropic)
18107522
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
18107522
NCBI-ProteinID:
XP_024445952
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Position
18:complement(864561..868994)
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AA seq
901 aa
AA seq
DB search
METNMRGNPPSNQVLPFLSFLSVHFFFLELVMAQNTTFIPVNVGLVLDLDYLEANIALSC
INMALSDFYATHGDYKTRMVLTTRDSKKDVVAAAAAALDLIKNVEAQAILGPTTSMQANF
VIGLGEKAQVPIISFSASSDSLTSTRSPYFFRATQNDSSQVNGIGALVQAFGWKEAVPIY
MDNEYGEGVIPYLTDALQAVDAHVPYRSVISPSATDDQIAEELYKLMTMQTRVFIVHMFA
SLGARLFVKAKEIGMMSKGYVWIMTDGPTVGLSTSPDPSVIDSMQGVLGIKPYIPKTTEL
GNFRLRWKRKFQQDNADMVDAELNIYALQAYDATVALAMAIEKAGTTNLGFREANVSNTS
VTDLENLGISQNGPNLLRALSNTSFKGVTGDFFFINGQLQPSAFEIVNMNGNGERRIGFW
IPRKGLAKTLNSIANTTSTYSTSKSSLAPVIWAGDSTSIPKGWEIPTNGKKLRIGVPRSS
TFGQFVKVTTDLNSNMTTVTGYCIAIFEAAVDALPYAITYEYIPFVKPDGRSAGTYNDLV
YQVYLKSYDAVVGDTTIIANRSKYVDFTLPYTESGVSMIVPIKDSRNKNAWVFLKPLTWD
LWVTSFCFFVLIGFVVWVLEHGINEDFQGPPSHQIGTSFWFSFSTMVFAHRERVVSNLAR
IVVTIWCFVVLILTQSYTASLSSVLTVQQLQPTVTNVDELIKKGEFVGYQPNSFVLGILK
NLGFDDSRLMAYNTPEECDELFSRGSGNGGIAAAFDEVPYMKFFLSMYCSKYTIIEPTFK
TGGFGFVFPKGSPLVADVSRAVLNVTEGDKMKEIEDAWLGTQSSCQESSTSVSSNSLSLK
SFWGLFLITGIASISALMIFTTIFVYEHRAVLLQPSDLRATTVEQSSCFVQNLHSNGLNI
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaaatatgaggggaaacccaccttcaaatcaagttctcccattcctttctttc
ctttctgtccattttttcttcttagaattggtaatggctcaaaacacaacgtttattcca
gtgaatgtaggtttggttcttgacttggattatttggaagcaaatattgcattgagttgc
atcaacatggccctctcagacttctatgccactcatggagactacaaaaccaggatggtt
ttgaccaccagggactccaagaaagatgttgttgctgcagctgctgcagccttggacttg
ataaagaatgtggaagcgcaagcaatcttggggccgacaacatcaatgcaagctaatttt
gttattggtctaggagaaaaagctcaagtgcccatcatatcattttctgcatcaagtgat
tctcttacttccaccaggagtccctatttttttcgagctacacaaaatgactcaagtcaa
gtcaatggcattggagcattagttcaagcctttggatggaaagaagcagtacctatctac
atggacaacgaatatggagagggagttataccttatttaactgatgctttgcaagcagtt
gatgctcatgtaccctaccggagtgtcatttctccatcggccactgatgatcaaattgct
gaggagctttacaagttgatgacaatgcaaacaagagttttcattgtgcacatgtttgcc
tctcttggcgctcggctttttgtcaaagctaaagagattgggatgatgagtaaaggctac
gtttggatcatgactgatgggccgactgtaggtctctcaacctcaccagatccttctgtc
attgattctatgcaaggggtattgggtattaaaccttatattccgaaaacaacggagctt
ggaaattttcggttacggtggaaaaggaaattccaacaagataatgcagacatggttgat
gctgagttaaacatttatgcactacaagcctacgatgctactgtagcattggccatggca
attgagaaagctggtacaacaaacttaggctttcgagaggcaaatgtttctaacacttca
gtaactgatctagaaaatctgggaatctctcaaaatggtccaaacctcctccgagcatta
tcaaacactagttttaaaggtgtaactggagatttcttcttcattaatggacagttacag
ccatcggcttttgaaatagttaatatgaatggaaatggagaaaggaggataggattttgg
ataccgagaaaggggctcgcaaaaacccttaactcgatagcaaataccacgagtacttat
tctacttccaagtccagtcttgcacctgttatatgggcaggggattcaacttctattccc
aagggctgggagattccgacaaatgggaagaagttgcggataggagtaccgagatcaagc
actttcggtcaatttgtgaaggtgacaacagatctcaattccaatatgacaacagtcaca
ggatactgcatagctatattcgaagctgcagttgacgcattaccttatgccataacttat
gagtacatcccctttgtcaagcctgatgggaggtctgctggaacttacaatgatctggtc
tatcaagtgtatttaaagagttacgacgctgtggtcggagatacaactatcatagccaac
aggtccaagtacgtcgattttacattgccttacacggaaagtggcgtctccatgatcgtt
ccaatcaaagacagcagaaacaaaaatgcttgggttttcttgaagcctttgacttgggac
ctttgggtcacaagcttttgtttctttgttctcatcggatttgtggtctgggttcttgaa
cacggaataaatgaagattttcaagggcctccttcgcatcaaataggcactagcttctgg
ttttctttctcaaccatggtttttgctcatagggagagggtggttagcaacttggctaga
atagttgtaaccatatggtgttttgttgtactcattcttactcaaagctacactgccagc
ctaagtagcgtgcttaccgttcagcagctccaacctacagttactaatgttgatgagctc
attaaaaagggggagtttgtgggataccagccgaactcttttgtgttgggaatcctgaaa
aacttgggttttgatgactccaggcttatggcttataatactccagaagaatgcgacgag
cttttttccagaggtagtggaaatggtggtattgctgccgcatttgatgaagtgccatac
atgaaattctttctatctatgtattgctcgaaatatacaataattgagcctacatttaaa
acaggcggtttcgggtttgtcttccctaaaggttcacctcttgtagctgatgtatcaagg
gcagttctaaatgtgaccgaaggagataagatgaaggaaattgaggatgcatggcttggc
acacaaagcagttgtcaagaatccagcacctcagtttcatctaatagccttagtctcaag
agtttttggggattatttcttattactggcattgcttcaatttcagctctcatgatcttc
acaaccatatttgtttacgagcacagagcagtactcttgcagccctctgatttaagagca
acaacagtggagcagagttcttgttttgttcagaatcttcattcaaatggacttaacatc
cagtag
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