Populus trichocarpa (black cottonwood): 18107659
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Entry
18107659 CDS
T01077
Name
(RefSeq) asparagine--tRNA ligase, cytoplasmic 1
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
18107659
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
18107659
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
18107659
Enzymes [BR:
pop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
18107659
Amino acid related enzymes [BR:
pop01007
]
Aminoacyl-tRNA synthetase
Class II (A)
18107659
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
18107659
Prokaryotic type
18107659
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
18107659
NCBI-ProteinID:
XP_006371955
UniProt:
B9N5I4
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All DBs
Position
18:8432774..8435674
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AA seq
568 aa
AA seq
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MGDPATPPASELAAMAIIDGASLKHPFSDRVPVRSIVCRPDGGAGLAGNRVRAGGWVKTG
REQGKGSFAFLEVNDGSCPANLQVIVDAGVEDLSTLVQTGTCVSVEGVLKVPPEGTKQKI
ELRVERVLHVGPTDPAKYPIPKTKLSLEFLRDHIHLRPRTNTISAVARIRNALAFATHSF
FQEHGFLYIHTPIVTTSDCEGAGEMFQVTTLINEAEKLDKELIENPPPTEADIEAARLTV
MQKGEIVAQLKAAKATRDDISAAVAGLKIAKENLSRLEERAKLKPGIPKKDGKIDYAQDF
FARQAFLTVSGQLQVETYACAVTSVYTFGPTFRAEHSHTSRHLAEFWMVEPEIAFADLQD
DMNCAEAYVKYMCQWLLDKCFDDMELMAKLYDKGCIDRLRMVSSTPFERISYTEAVRLLE
EAVRGGKEFEKNVEWGIDLASEHERYLTEEIFKKPVIVYNYPKGIKAFYMRLNDDSKTVA
AMDILVPKVGELIGGSQREERYEVIQQRIAEMGLPLEPYDWYLDLRRYGTVKHCGFGLGF
ERMILFATGIDNIRDVIPFPRYPGRADL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgggagacccggccacgccgccagcatcagaactcgcagcgatggccataatcgacggc
gcatctcttaagcacccattttccgacagagtcccggtccgatccatcgtgtgtcgtccc
gatggcggagctggactggccgggaatcgagtccgcgctggtgggtgggtgaagaccggg
agagagcaagggaagggctccttcgcattcttggaggtgaacgatgggtcttgtccagcc
aaccttcaggttatcgtggatgctggtgtagaagatctgagcacgcttgtgcagactggg
acttgcgtgtccgttgagggcgtgcttaaggttcctcctgagggtacaaagcagaagatt
gagctccgtgttgaaagggtgctccatgtaggccccacagatcctgcaaagtacccgatt
cccaaaacgaagctctctcttgagtttttgagggatcatattcaccttcggccccgaact
aacacgatttctgcagttgctcgaattcgcaatgcacttgcttttgccacacactctttc
tttcaagagcatggttttctatacattcacaccccaattgtcaccacaagtgattgtgaa
ggtgccggtgaaatgtttcaagttactaccttgattaacgaagctgaaaagctcgacaag
gagctgattgagaaccctcctcctacagaggctgacatagaagctgcaaggcttactgtt
atgcagaaaggtgagattgttgctcaactcaaagctgctaaggcaaccagggacgatatt
agtgctgcagtcgcaggactaaaaatagctaaagagaatctctcaaggctggaggaaaga
gctaagcttaaacctggtatccctaaaaaagatggcaagattgattatgctcaagatttc
tttgcccgtcaagcttttttgactgtctctggccagcttcaagttgaaacatatgcctgt
gctgtcactagtgtctatacattcggaccaacctttagagctgagcattctcacacttca
aggcatttggctgagttttggatggtggagcctgaaatagcatttgctgatcttcaggat
gacatgaactgtgcggaggcatatgtgaaatacatgtgtcaatggctactcgacaagtgc
tttgatgacatggaacttatggcaaagctttatgataaaggttgcattgaccgtctaaga
atggtttcttctaccccttttgagcgtatttcttacacagaagcagtgcgactgctagag
gaggcagtgaggggtggcaaggagtttgagaagaatgtggaatgggggattgatttggca
tccgagcatgaaagatacctgacagaggagatatttaagaagcctgtaattgtgtacaac
tatccgaaaggaataaaagctttctacatgaggctcaatgatgattcaaagacagtggct
gctatggatatccttgtaccaaaggtgggagaattgattggtggaagccaaagggaggag
cgctatgaggttattcagcagagaattgctgagatgggactgcctcttgagccatatgac
tggtaccttgacctgcgacgttacgggactgtaaaacattgtggatttggcttgggcttt
gagaggatgatactttttgccaccggaattgacaatatcagagatgtcatcccattcccc
agatatccgggcagagcagatctgtga
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