Populus trichocarpa (black cottonwood): 18107793
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Entry
18107793 CDS
T01077
Name
(RefSeq) class V chitinase CHIT5a isoform X4
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00520
Amino sugar and nucleotide sugar metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
18107793
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
18107793
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Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
18107793
NCBI-ProteinID:
XP_006372127
UniProt:
U5FI21
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Position
18:12959789..12964654
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AA seq
375 aa
AA seq
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MASHKLVLLLPVIVLFTITTGYVMASPPAVKAAYWPSWTQTFPPSAIDTTLFTHVFYAFL
LPSNVTFKLEVSESTASLLKNFTGTLHQKNPPVKTLVSIGGGSSDPKLFARMASNKGSRS
IFIDSAMEVARRHGFDGLDLDWEFPKDPKEMVDLGQLFKEWRVAIRKEAKSTHRSPLLLT
AAVYFSVDFQWDETYRKYPVASIAKSLDWVNAMCFDYRGSWDTSATGAHAALYDPKSNIS
TSYGLTSWVRAGVPRNMVVMGLPLYGRTWQLKDPKVNGIGAPATAAGPGDDGVLIFSQVE
KFNKENGATVVYDAKTVSTYSYAGTSWIGYDDSRSTTVKLKFAQALGLRGYFFWALSYDS
EWEISKQASRAWVIG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggctagccacaaattggttcttctccttccagtcattgtactctttaccatcaccacc
ggatatgtcatggcttcacctccggctgtcaaagctgcgtattggccttcttggactcaa
actttcccaccttcagccatagacaccactttgttcacacacgtcttctatgcctttctc
ttgccgagtaatgtcactttcaagctcgaagtatccgagtcaactgcttccctgctcaag
aatttcactggcacccttcatcagaaaaacccaccagtgaagacactagtctcaattggg
ggaggtagtagtgatccaaaactctttgctagaatggcgtcaaataaagggtcacgtagc
attttcatagattcagcaatggaagtggcgagaagacatggatttgatgggctggatctt
gactgggaatttcctaaggacccaaaagagatggttgacttgggccagctgtttaaagaa
tggagagttgctatcagaaaggaagccaagtccacccaccggtctcctctgttgctcacg
gctgccgtctacttctccgtcgactttcaatgggacgagacctaccggaagtatccagtg
gcatccatcgccaaaagcttggattgggtcaatgcaatgtgttttgattatcgtggttca
tgggacacttcggctacaggagctcacgcggcattatatgatcctaaaagcaacatcagc
acgagctatgggcttacgtcgtgggttcgtgctggtgtgcctcgaaacatggtggtcatg
ggcctgcccctgtacgggaggacttggcagcttaaagacccgaaggtaaatggaatcgga
gcaccggccacggcggccggtcctggagatgatggcgtcctgatattttcccaggtggag
aaattcaataaagagaatggtgccaccgtggtgtatgatgccaaaactgtatccacgtat
tcttatgccgggacttcttggattggatatgatgatagccgatccacaactgtgaagcta
aagtttgctcaggcacttggtcttcgtggttacttcttttgggccctcagttatgatagc
gagtgggaaatctcaaaacaagcttcaagggcatgggtcatcggataa
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