Populus trichocarpa (black cottonwood): 18107883
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Entry
18107883 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC18107883
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
18107883
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pop01003
]
18107883
Enzymes [BR:
pop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
18107883
Glycosyltransferases [BR:
pop01003
]
Polysaccharide
Storage polysaccharide
18107883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
18107883
NCBI-ProteinID:
XP_006372249
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All DBs
Position
18:16067970..16074846
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AA seq
618 aa
AA seq
DB search
MIMENALAGKFLKPCFHLNSRKATLVLQKRKGIGTSHKFCYPSKFKIHPLVSHPLHLPNL
EAGGVEIQESSYEGLVSDQEIVWPSPDDEIPFWKRDFPSWNVSPEVPNESSVKDSDLMHI
IHVTAEMAPIAKVGGLGDVVTGLARASLSRGHTVDIVLPFYECIQKQQINDLALISTYDS
YHDGNWIPTNAYRGVVSGIPVIFIEPSNEFFKGQQVYGGSYNELEAYLFFSRACLEWMQV
TGAQPDIIHVHEWQIGALPLLYWDMYQYLSLKKPRIVLTIHNMEHYGECRQEQLSKCGLD
GSMYATAEKAVDDRTIGHNPERLSLLKGGIVYSNAVVTVSPTYLKETLCSGWLASTLMMH
CDKYFGVLNGIDTAMWNPATDVFLPAKFHAQKIEGKKLCKYYIQRGLGLAAKSITSSNHV
PDATVKIPLVVCITRLVPQKGLHLITHALKHIEELGGQMIVLGKAPDGRVEGEFKRLADM
HNQGPSIRILLMYSEELSHMLYAAADMVLVPSMYEPCGLSQIIGMRYGSVPVVRKTGGLA
DTVFDMDDQSNPEIANGFVFEGIDEGSLNWALDRAFAYYRDKPDEWNCIVKKVIEIDNSW
NNTAGKYIEVYNSVRGRS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgataatggagaatgcattagcaggtaagtttcttaagccatgcttccatttgaattca
agaaaagcaacattggtactgcagaaaaggaagggaattggcacctcccacaagttctgc
tatccttccaaattcaagattcatccccttgtttctcatccccttcatctccccaattta
gaggcgggtggtgttgaaatacaagaaagtagttatgaaggtttagtttctgatcaagaa
attgtctggccttctcccgatgatgaaatcccattttggaagagggatttcccttcctgg
aatgtgagtccagaagtgccaaatgaaagttctgtgaaggattctgatcttatgcacata
attcatgtcacagctgagatggcaccaatagctaaagttggtggacttggtgatgttgtt
actggacttgctcgagcaagtctttctcgtggccatacagtggatatagtgctccccttc
tatgagtgcattcagaagcagcaaatcaatgacttggcattgatcagtacttatgattct
tatcatgatgggaattggattcctactaatgcctatcgtggagttgtttcgggcattcca
gtgatatttattgagccatcaaatgaattcttcaaggggcaacaagtatacggaggttca
tataatgagctagaggcttatttgttttttagccgtgcttgccttgaatggatgcaggta
acaggtgctcagcctgacattatccatgtccatgaatggcaaataggtgccttgcccctg
ctttactgggatatgtatcaatatctttcactgaagaaaccacggattgtattaactata
cataacatggagcattatggagagtgccgccaagagcaactcagcaagtgtggtcttgat
ggttctatgtatgcaacagcggagaaggcagttgatgatcggactattggccataatcct
gagagactaagcttattgaaaggtggaattgtatacagcaatgcagtggttacagtctcg
ccaacataccttaaggaaactctctgctctggttggttggccagcactctaatgatgcat
tgtgataagtactttggtgttttgaatgggattgacactgcaatgtggaaccctgctacc
gatgttttcttgcctgctaagttccatgctcaaaaaattgagggcaagaagttatgtaaa
tactacatacaaagggggcttggtttggctgctaaaagcatcaccagcagtaatcatgtg
ccagatgcaacagttaagatcccattggtagtctgtattactagactagttcctcaaaag
ggtctgcatttgattactcatgcacttaagcatattgaagaactgggggggcagatgatt
gtccttggaaaagctccagatggtcgagttgaaggggaattcaaacgtcttgcagatatg
cataaccaaggtcctagcatccgtatccttttgatgtatagtgaggagctgtcccacatg
ctttatgctgcagcagacatggtgttagttccttccatgtatgagccatgtggactttcc
caaatcattggaatgcgttatggatcggttccagttgttagaaagactggtggcctcgca
gacacagtctttgacatggatgaccagtcgaaccccgagattgctaatgggtttgttttt
gaaggaattgatgaaggatccttaaactgggctctagaccgcgcatttgcttactacaga
gataaaccagatgagtggaattgcattgtgaagaaggtaatcgaaattgacaatagctgg
aacaacacggctgggaaatacatcgaagtttacaattcagttagagggagatcttga
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