Populus trichocarpa (black cottonwood): 18107892
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Entry
18107892 CDS
T01077
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 6
KO
K19893
glucan endo-1,3-beta-glucosidase 5/6 [EC:
3.2.1.39
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00500
Starch and sucrose metabolism
pop01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
18107892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pop00537
]
18107892
Enzymes [BR:
pop01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
18107892
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pop00537
]
Enzymes
18107892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
18107892
NCBI-ProteinID:
XP_006372260
UniProt:
U5FL22
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All DBs
Position
18:complement(16119127..16123810)
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AA seq
482 aa
AA seq
DB search
MGLYHLAIGLVSLLSMVSGAMTIGANWGTQASHPLPPETVVRLLRENGIQKVKLFDADYD
TLKVLGKTGIEVMVGIPNDLLASLAGSMKAAEKWVSRNVSAHVTNNNVNIRYVAVGNEPF
LQTYNGSFLRTTFPALQNVQSALIKAGLGNLIKVTVPLNADVYESSSGLPSGGDFRADIH
DLMLTIVKFLNDAGAPFTVNIYPFISLYIDSNFPVEYAFFDGNANPVNDGGTSYYNMFDA
NYDTLVNALQKNGFGNLPIIVGEIGWPTDGDRNANVEYARRFNQGFMSHIASGKGTPMRP
NAGINAYLFSLIDEDAKSIDPGNFERHWGIFTFDGIPKYSLNLGTTNTGALIPARSVHYL
ERKWCVMKPSAKLDDPQVAPSVSYACGLADCTSLGYGTSCGNLDPRENISYAFNSYFQIQ
NQLGDACKFPNLSTITRTDPSTSTCRFAIMIEPYYGGVGQTFRYGKKVALGGLIALFFLT
IV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgtatcatttggctattggattagtttccttgctttctatggtgagtggtgcg
atgaccataggtgccaactggggaacacaagcatcccaccccttgcccccagaaactgtg
gtgaggctacttagggaaaatgggatccaaaaagttaaactttttgatgcagattatgat
actctaaaagttctaggtaagactgggattgaggtcatggtgggtattccaaatgatttg
cttgcttctctcgctggtagcatgaaggctgctgagaaatgggtttcaagaaatgtctcc
gcacatgtcaccaacaataatgtcaacatcagatatgttgcagttggaaatgaacctttc
ttgcagacgtacaatggaagctttctcagaacaaccttccctgctctccagaatgtccaa
tctgctctgataaaagctgggcttggcaatttaataaaggtcactgtccctctgaatgct
gatgtctatgagagctcaagtggtcttccttctggtggtgacttccgagctgatatccat
gatctcatgcttaccattgtaaaattcttgaatgatgccggtgccccctttactgtgaat
atctatcctttcataagcctctatattgattccaacttcccggttgagtatgccttcttc
gatggcaatgcaaatcctgtaaacgatggtggcacatcctattataacatgtttgatgct
aactatgatacacttgtgaatgctctacaaaagaatgggtttgggaatctacctatcatt
gttggagagatcggatggccaactgatggagacagaaatgctaacgtagaatatgcccgg
cgtttcaaccaaggtttcatgtcacacattgcaagtgggaaaggaaccccaatgaggcct
aatgccggtattaatgcctatttgttcagtttgattgatgaagatgctaaaagtattgat
cctggaaacttcgaacggcattgggggatatttacatttgatggaatacccaaatacagt
ctcaaccttggcacaacaaacacaggagctttaattccagctagaagcgtccactacctg
gaaagaaaatggtgtgtgatgaagccgtcggccaagcttgatgacccacaagtggcacca
agtgtaagctatgcgtgtggactagcagactgtactagcctcggttatgggacatcatgt
ggaaatttggatcctagggagaacatatcatatgcattcaacagctacttccagatacaa
aatcaactgggagatgcatgcaagtttccaaacctgtcgacaataaccaggacagatcca
tcaacttcaacttgcagatttgcgataatgatagagccatactatggtggcgtgggacag
acattccggtatggcaagaaggtggccttgggtggtttgattgctctatttttcctaacg
attgtgtaa
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