Populus trichocarpa (black cottonwood): 18107996
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Entry
18107996 CDS
T01077
Name
(RefSeq) aspartic proteinase nepenthesin-1
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18107996
Peptidases and inhibitors [BR:
pop01002
]
Aspartic peptidases
Family A1: pepsin family
18107996
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Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
18107996
NCBI-ProteinID:
XP_006370905
UniProt:
B9N2J4
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Position
19:816481..818361
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AA seq
439 aa
AA seq
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MANMSSLSLVVALAIFAFVFSHAFSTSRRVLEHPKVQNGFRAKLKHVDSGKNLTKFERIQ
HGVKRGRHRLQRFKAMALVASSNSEIDAPVLPGNGEFLMKLAIGTPPETYSAIMDTGSDL
IWTQCKPCTQCFDQPTPIFDPKKSSSFSKLSCSSKLCEALPQSTCSDGCEYLYGYGDYSS
TQGMLASETLTFGKVSVPEVAFGCGEDNEGSGFSQGSGLVGLGRGPLSLVSQLKEPKFSY
CLTSVDDTKASTLLMGSLASVKASDSEIKTTPLIQNSAQPSFYYLSLEGISVGDTSLPIK
KSTFSLQEDGSGGLIIDSGTTITYLEQSAFDLVAKEFTSQINLPVDNSGSTGLEVCFTLP
SGSTDIEVPKLVFHFDGADLELPAENYMIADASMGVACLAMGSSSGMSIFGNIQQQNMLV
LHDLEKETLSFLPTQCDEL
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctaatatgtcttctttgtctttagtcgtagcactggcaattttcgcctttgttttt
tctcatgcattttctacatcacggcgagttttagagcatccaaaggtgcaaaatggcttc
cgagcgaagctcaaacatgttgattcgggtaagaacttaacgaaatttgagcgtattcaa
cacggggttaagcgtggaagacacaggttgcaaagattcaaagcaatggcactggtagca
tcttctaattctgagattgatgccccagttcttcccgggaatggtgagttcttgatgaag
ctagctattggcacgccaccggagacttattctgcaataatggacacaggtagcgatttg
atatggactcagtgcaagccttgcacacagtgttttgatcaacccactcctattttcgat
ccaaaaaagtcctcttctttctctaagttatcatgttctagcaaattatgtgaagcatta
ccccagtccacttgcagcgatggctgcgaatatctgtatggttatggcgattattcttca
acacaaggaatgctggcaagcgaaactctcacgtttggcaaggtttcagttcctgaagtt
gcattcggttgcggagaagataacgagggaagtggattcagccagggttctggcctagtg
gggcttggccgtggacccttgtcattggtttctcaactcaaggagcccaagttctcatat
tgcttaacctctgttgatgacacaaaagccagcacactattgatgggatctctagcaagt
gtgaaagcatcagacagtgaaatcaagaccacccctttaatccagaactcagcacagcca
tcattttactatctttcccttgaaggaatatcagtgggtgacactagtttacctatcaag
aaatctaccttttcactccaagaagatggaagtggtggccttattattgactctggcact
acaataacctatttagaacaaagtgcttttgatttggtagccaaagagttcacctctcag
attaatctcccggtggacaattccggctcgactgggctcgaagtttgcttcacattgcca
tcaggctcgaccgatatagaggtgcctaagttggtattccactttgatggagcagacttg
gaattgccagccgaaaactatatgattgccgatgcaagcatgggagtagcttgcttggcc
atggggagctcaagtggcatgtctattttcggcaatattcagcaacagaacatgttagtg
ctccatgatcttgagaaggaaaccttgtcattccttccaacacagtgtgatgaactatga
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