Populus trichocarpa (black cottonwood): 18108063
Help
Entry
18108063 CDS
T01077
Name
(RefSeq) myosin-11
KO
K10357
myosin V
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
18108063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18108063
04131 Membrane trafficking [BR:
pop04131
]
18108063
03029 Mitochondrial biogenesis [BR:
pop03029
]
18108063
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pop04812
]
18108063
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
18108063
mRNA cycle factors
P-body specific factors
18108063
Membrane trafficking [BR:
pop04131
]
Others
Actin-binding proteins
Myosins
18108063
Mitochondrial biogenesis [BR:
pop03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
18108063
Cytoskeleton proteins [BR:
pop04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
18108063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
Zeta_toxin
AAA_16
AAA_22
DUF1131
CbiA
Fez1
Motif
Other DBs
NCBI-GeneID:
18108063
NCBI-ProteinID:
XP_024447077
LinkDB
All DBs
Position
19:1806313..1818218
Genome browser
AA seq
1525 aa
AA seq
DB search
MGSKENIIVGSHVWVEDHELAWLDGKVSKITGQDAEIEASNGKKVTAKLSKIYPKDMEAP
AGGVDDMTKLSYLHEPGVLENLKTRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMQQY
KGAPFGELSPHVFAVADVSYRAMVIEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRA
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKHGRISGAAIRTYLLE
RSRVCQVSNPERNYHCFYLLCAAPQEEIERYKLGSPKSFHYLNQSTCFELVGVSDAHDYL
ATRRAMDIVGISAREQEAIFRVVAAVLHIGNIDFAKGKEVDSSVPKDDQSKFHLKTTAEL
LMCDPVALEDALCKRVMITPEEVIKRSLDPQSAVISRDGLAKTIYSRLFDWIVDKINNSI
GQDPNSKSLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYTKEQID
WSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSNKLYQTYKVHKRFIKPKL
SRTDFTIAHYAGEVQYQSDHFLDKNKDYVVPEHQDLLGVSKCPFVAGLFPPLPVETSKSS
KFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNQLKPAIFENINIMQQLRCGGVLEAI
RISMAGYPTRRPFFEFVNRFGLLFPEALAGSYDEKVACKKILEKKGLQGFQIGKTKVFLR
AGQMAELDARRAEVLNNAAKTIQGCVQTHYARKRFIALRKATVLVQSLWRGRLACKIFDR
MRREAAAIKIQKHTRKYAARTAYKKLHVSALVVQTGLRAMIARKEFRFRKRTKAATIIQA
RWRCHKAVSYYKRLKRGAVVTQTGWRCRVARRELRLLKMAARDTGALREAKDKLEKHVEE
LTWRLQLEKRLRTDLEEARAQEAVKFQNSLEEMKIKIEEANALIVKEREAAKNAINEAPP
VIKETQVLVEDTKKIDSLTDEVENLKVTLDYEKQRADDTQKKYSEVQEISEERRVKLEET
EKKVQQLQESLQRLEEKLTNLESENKVLRQQALSMAPNKFLSGRSRSVMQRVESHIPVDA
ARTSLDLQSPSVNHREHSEVDDKPQKSLNEKQQENQELLIRCVAQHLGFAGNRPIAACII
YKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDSLAYWLSNASTLLLLLQRTLKASG
AAGMAPQRRRSSSATIFGRMTQSFRGAPQGVNLSLINNGGVDTLRQVEAKYPALLFKQQL
TAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGARSVANTAAQQALIAHWQGI
VKSLGNFLSTLKSNHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKTGLA
ELEHWCYNATDEYAGSSWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRI
STMYWDDKYGTHSVSTDVISNMRVLMTEDSNNAVSSSFLLDDDSSIPFSVDDLSKSMEQI
DIADIEPPPLIRENSGFSFLLPRIE
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtaaggagaatataattgtaggttctcatgtttgggttgaagaccatgagttg
gcttggcttgatgggaaggtatcaaagattactggacaggatgccgagatcgaagcttca
aatgggaagaaggtcacggcaaaattatcgaaaatatatccgaaagatatggaagctcct
gctggtggagttgatgacatgacaaagctttcttacttgcacgagcctggagttctggag
aacctgaaaacaagatatgagctgaatgaaatctatacgtatactggaaatattcttatt
gccatcaatccatttcaaagactgccccatctctatgatggtcacatgatgcaacaatac
aagggagcaccatttggagagttaagtcctcatgtttttgcggttgctgatgtttcatac
agggcaatggtcattgaagggaagagcaattccattttggtcagtggtgaaagtggtgcg
ggtaaaaccgagaccacgaaaatgcttatgaggtaccttgcatttttaggcggtcgagct
gccactgaaggacgaacagttgaacaacaagttcttgaatcaaatccagtccttgaagca
ttcgggaatgctaaaactgttagaaataacaattccagccgttttggtaaatttgttgag
atccagtttgacaagcacggaagaatttctggagctgccatcagaacttaccttctagag
agatctcgtgtttgccaagtttccaatcctgagcgcaactaccattgtttttaccttctt
tgtgccgcaccacaggaggaaatagagaggtataagttggggagcccaaaatcattccac
tatcttaaccagtcaacttgctttgaactagttggtgtaagcgatgcgcatgactacctt
gccacaagaagagctatggatattgttggaataagtgcaagggagcaggaagcaattttc
agagttgttgctgcagtccttcatattggaaatattgattttgctaagggaaaggaagtt
gattcatcggtacctaaagatgatcaatctaaattccatctcaaaacaactgcggagctg
ctaatgtgtgatcctgttgccttggaagatgcattatgcaagcgtgtcatgatcactccc
gaggaggttatcaagcgaagtcttgatcctcaaagtgcggtgattagcagggatggttta
gctaagacgatttattctcgtttatttgattggatagtggataagattaataattccatt
ggacaagatcctaactcaaaatctctgattggcgtcctcgacatctacggttttgaaagc
ttcaagacaaatagctttgagcagttctgtattaattacacaaacgagaagttgcagcag
catttcaaccagcacgtcttcaaaatggaacaagaggaatacacaaaagagcagattgat
tggagctacattgagtttgtcgataatcaagatgtcttggatcttattgaaaagaaacca
ggtgggatagtagctctccttgatgaagcttgcatgtttcccaagtcgacacatgaaaca
ttttcaaacaagctttatcaaacatataaagttcacaagcgctttatcaagccaaaattg
tctcgcacggatttcaccattgctcattatgctggagaggtccagtatcaatccgaccac
tttttggacaagaacaaagactatgtagttcccgaacatcaagatttgttgggtgtttcc
aaatgtccttttgtagcaggtcttttccctccacttccagtagagacaagcaaatcttca
aagttctcttcgattggttctcgttttaagctacaacttcaacaactaatggaaacatta
aattctactgaacctcactacataagatgtgttaagccaaacaatcagctaaaacctgcc
atatttgagaatatcaatatcatgcagcaattgcgttgtggtggtgttttagaagcaatc
cgaattagtatggctggataccctactcgtcgccctttctttgaattcgtaaatcgattt
ggacttcttttccccgaggctttggcaggaagctatgacgaaaaggttgcttgcaaaaag
attttggaaaagaagggacttcaagggttccagataggtaaaactaaggtattcttgaga
gctggtcagatggctgaattggatgcaagaagagctgaggtactcaacaatgcagcaaaa
accatccaggggtgtgtacagacgcattatgctcgtaaaaggtttattgcgttgcggaag
gctactgtattggtgcaatcactatggagaggaagactggcttgcaaaatttttgacaga
atgaggagggaggcagctgctataaaaattcagaagcatacacgtaaatatgcagccaga
acagcctacaagaaacttcatgtatctgcacttgtcgtgcaaacaggtttaagagctatg
attgctcgcaaggaattcagatttaggaaacgaactaaagctgcaaccattatccaggcc
cggtggcgctgtcataaagctgtttcctactataagaggctaaagagaggtgcagttgtc
acacaaacaggatggaggtgtagagttgctagaagagagctaaggttgctcaaaatggct
gcaagagacaccggcgcactaagagaagccaaagacaagcttgaaaaacatgtagaggaa
ctcacatggcgtttacaactcgaaaaacgattaaggaccgatttggaagaagcaagagcg
caagaggcagtgaaattccagaattcattggaagaaatgaaaattaaaatagaagaagcc
aatgctttgatagtcaaggagagggaggctgcaaagaatgctattaatgaggcacctcct
gtaattaaagaaactcaagtactcgttgaagatactaagaaaattgattctctaacagac
gaagtagaaaacctaaaggtcacgttagattatgagaaacaaagagctgatgatactcaa
aagaaatacagtgaagtacaagagattagcgaagaaagacgggtgaaattggaagagacg
gagaaaaaggttcaacaacttcaggaatccttgcaaaggctagaagagaaacttaccaat
ttagagtcggagaataaagtcctacggcaacaggctctgtccatggcacccaacaagttc
ctctcaggacgctccagatcagtaatgcagagggttgaaagtcatattccagttgatgct
gcaagaacaagtttggatctgcagagcccttcagtgaaccacagggagcactctgaagta
gatgataaaccacagaagtcattaaatgagaaacaacaggagaaccaggagttgctcatt
cgttgcgtcgcacaacacctaggctttgcagggaatagacctatagctgcttgtatcata
tacaagtgccttttgcagtggagatcatttgaagttgagcgaaccagtgtgtttgatcgg
atcatccagaccataggccatgctattgagacccaggataacaatgatagcttggcctat
tggttatccaatgcctcaacacttctcttactgcttcaacgtacattgaaagcaagtggt
gcagcaggaatggctccacagcgccgacgatcatcatcagctactatatttggaagaatg
acacagagtttccgtggagctccacaaggagtcaatctatccttgatcaataatggtgga
gtggacactttgcggcaagttgaagccaagtaccccgctttgcttttcaagcagcagctt
acagcatatgtagaaaaaatttatggaatgattcgggataatctgaagaaagaaatatct
cctttgcttggattatgcatccaggcaccaagaacatccagagcaagcttagtgaagggg
gcacgctcagtagccaacactgcagcccagcaagccctgattgctcactggcaagggatt
gtgaagagccttggaaacttcttaagcactttgaaatctaatcatgtacccccattttta
gttcgtaaggtgttcacgcagatattttccttcatcaatgttcaactattcaacagcctt
ctattaagaagagaatgctgttcatttagcaatggtgaatatgttaaaactgggttggcc
gaattggagcactggtgttacaacgcaacagatgagtatgcaggttcatcctgggatgag
ctcaagcatattagacaggctatcgggtttctggttattcatcagaagccgaagaaaact
ttggatgagataagccatgacctgtgcccggttctaagtatccagcagctataccgtatc
agtaccatgtactgggatgacaagtacggcacacacagtgtgtccaccgatgttatatcg
aatatgagggtgctgatgacggaagattcgaataatgcagttagcagttctttcctgctg
gatgatgattcaagcattccattttcagttgatgacttatcaaagtccatggaacaaatt
gacattgctgacattgaaccaccacctctgattcgcgagaactcgggctttagtttcttg
ctgccgcgcatcgaataa
DBGET
integrated database retrieval system
