Populus trichocarpa (black cottonwood): 18108164
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Entry
18108164 CDS
T01077
Name
(RefSeq) probable terpene synthase 6
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
18108164
Enzymes [BR:
pop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
18108164
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Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
FlaC_arch
DUF5769
Motif
Other DBs
NCBI-GeneID:
18108164
NCBI-ProteinID:
XP_052305285
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All DBs
Position
19:2681843..2684816
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AA seq
551 aa
AA seq
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MENTNQQNNSRGKADFPPSLWGCSFAPFCFPQMEFESYSRQVEELKENVKDMLMASKKDP
VEHIEFINLLCRLGVSYHFDKEIENNLKEIFADLPNLLEKHDFDLYTLSLLFRVFRQHGF
KMPCVVFDKFKDTKGEFKETIINDVKGILGLYEASFLSVHGEQVLDEALVFTKANLESSA
MQSSPRLADHIRNALIRPFHKGVPRIEARKYISFYEEDESRNDTLLKFAKIDFNRVQLIH
RQELSILSRWWNDLNFAEEFPYARDRIVEIYFWANGVHFEPQYAFSRMMVTKYMKIVSLV
DDTYDAYASFEEIQHFSNAIERCSMNAIDQLPADYMKVLYRALLSLFNDTENDMGKQGRS
YASYYLKEEFKELVRGYHAEAEWADKCHVPTFDEYVRNGLATSGYGVIMAASFLGMEEVA
GGEEYEWLKSNPKIIKAGKMIGRLMNDIVGHEDEQKRGDCASGVECYMKQYDVSEKKAIE
EIQKMDVNAWKDINEDCMRPTNAPMLLLQHFVNLVRVTDVIYENDDDSYTIPLGLKDYVA
LLYIEQLPLYE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaccaatcaacaaaacaattctcgtggaaaggcagatttcccaccaagcttg
tggggttgtagcttcgctccattttgcttcccacaaatggaattcgagtcatacagccga
caagtagaagagttgaaggaaaatgtgaaggacatgctgatggcatccaaaaaggaccca
gtggaacatattgaattcattaatctgttatgtcggcttggtgtgtcgtatcattttgac
aaagagattgaaaacaacctcaaagaaatttttgctgaccttcctaatcttcttgagaag
catgactttgatctctacactttgtcacttctatttcgagtattcagacagcatggattc
aaaatgccttgcgttgtgttcgacaagttcaaggacaccaaaggagagtttaaggaaaca
atcatcaacgatgttaaaggcatcctgggcttgtatgaagcttcatttttaagtgtgcat
ggagaacaggtactggatgaagcccttgttttcacaaaggcaaacctggagtcttcggct
atgcaatcaagcccacgtctagcagaccatattaggaatgctttgatccggccctttcac
aaaggcgtaccaagaatagaggctagaaaatacatctctttctacgaagaagatgagtct
cggaatgacactctactcaagtttgccaagatagatttcaatcgagttcagttaatacat
cgacaagagctatccattctctcgaggtggtggaatgatttaaattttgctgaggagttt
ccatatgcaagagatagaattgtagagatctatttctgggcaaatggagtccatttcgag
cctcaatatgctttctctcggatgatggtcacgaaatatatgaaaattgtatcactggta
gatgatacatacgatgcatatgcatcttttgaagagatacaacatttttctaatgcaatt
gaaagatgcagcatgaatgctattgatcaactacctgccgattacatgaaagttctttat
agggctcttctgagtcttttcaacgacactgagaatgatatgggaaagcaaggaagatcc
tatgcctcatattatttgaaggaggaattcaaagaattggtgagaggctaccatgcggag
gcggagtgggcagataaatgccatgtcccaacattcgacgagtatgtgcgcaatggatta
gccacaagtggttatggggtaattatggcagcatccttccttggaatggaagaagttgca
ggaggggaggagtatgaatggctaaaaagtaatccaaaaattattaaagctgggaagatg
atcggtcgtttgatgaatgacatagtgggccacgaggatgaacaaaagagaggagactgt
gcatccggcgttgaatgctatatgaaacaatatgatgtatcggagaagaaagcaattgaa
gagatacaaaagatggacgttaatgcgtggaaggatatcaatgaagattgcatgaggcca
actaatgctccaatgcttctccttcaacattttgttaaccttgttcgagttacagatgtt
atttatgagaatgatgacgattcctacacaattccattaggtttaaaagattatgtcgct
ttattatatattgagcaactgcctctgtatgaataa
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