Populus trichocarpa (black cottonwood): 18108299
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Entry
18108299 CDS
T01077
Name
(RefSeq) serine/arginine-rich splicing factor RSZ21 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18108299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
18108299
Spliceosome [BR:
pop03041
]
Common components
Common spliceosomal components
SR proteins
18108299
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
Motif
Other DBs
NCBI-GeneID:
18108299
NCBI-ProteinID:
XP_024447636
LinkDB
All DBs
Position
19:8345831..8352732
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AA seq
180 aa
AA seq
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MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG
KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFARECRLRIGSRGLGSSRR
RSPSPRRRGSPSYGYGRRSYSPRERRSPRRRSLSPRRGRSYSRSPPYRHGRRDSPYAIGD
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgtttatgttgggaatttggatccgcgcgtctccgagagggatctcgaagat
gaattccggatgtatggtgttcttcgtagtgtctgggttgctcgaaggccaccaggatat
gcatttgttgagtttgatgatcgcagggatgctatagatgcaattcgcgcattggatgga
aagaatggctggcgtgtggagctttcccataattctaagggtggtggaggccgtagtggc
gatggacatggacgtggtggaggtgaggactcaaaatgttatgagtgtggtgaacctggt
cattttgcacgagagtgtcgcctgcgcattggctcacgaggcttgggaagtagtcgtcgt
cgaagccccagtcctcgccgccgtggaagtccaagttatgggtatgggcgcaggagttat
agcccccgtgagagaagatctccaagacgccggagcctttcacctcgccgaggtcgcagc
tatagcaggtcccctccatatcgtcatggccgccgtgattcaccttatgctattggcgac
tga
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