Populus trichocarpa (black cottonwood): 18108411
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Entry
18108411 CDS
T01077
Name
(RefSeq) dynamin-2A
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04144
Endocytosis
pop05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
18108411
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
18108411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
18108411
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
18108411
Enzymes [BR:
pop01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
18108411
Membrane trafficking [BR:
pop04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
18108411
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
18108411
RhoA-dependent endocytosis
18108411
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
18108411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
PH_8
PH_11
MMR_HSR1
AIG1
ARGLU
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
18108411
NCBI-ProteinID:
XP_006371382
LinkDB
All DBs
Position
19:complement(10925516..10937503)
Genome browser
AA seq
920 aa
AA seq
DB search
MEAIEELSQLSESMKQATALLADEDVDENPSSSSRRSSTFLNVVALGSVGAGKSAVLNSV
IGHPVLPTGESATRAPISIDLQKDGSLSSKSIVLQIDNKSQQVSASALRRSLQDRLSKGV
TDNIRDEIYLKLRTSTAPSLKLIDLPGLGQRIVDESMVGDYAEHSDAILLVIVPAAQAPE
IASYRALRIAKEYDGEGTRTVGVISKIDQAATDQKALAAVQALLLNQGPPKTTDIPWIAL
IGQSVSIASAQSGSESSLETAWKAESESLKTILTGAPQSKLGRIALLDALAQQIRKRMKV
RLPNVLSGLQGKSQTVQDELMRLGEQMVQSAEGTRAIALELCREFEDKFLQHIMTGEGSG
WKIVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKGVLEL
AKEPSRLCVDEVHRVLVDIVSASANATPGLGRYPPFKREVVAIASAALDGFKNESKKMVV
ALVDMERVFVPPQHFIRLVQRRMERQRREEELKNRSSKKGNDAEQAILNRATSPQTGGSL
KSMREKSNQADKEVQEASSLKTAGPEGELTAGFLSKKSAKTNGWSKRWFVLNEKTGKLGY
TKTQEERHFRGVITLEECNIEEVPDEEEPPSKSSKDKKVNGPDTKAPSLVFKMTSKVPYK
TVLKAHSAVILKAESMADKVEWINKILKIAQPSKGGKMRGVSPEGGPAMRHSLSDGSLDT
MARRPADPEEELRWMSQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLNQLYSSISA
QSTARIEELLQEDQNVKRRRERYQKQSSLLSKLTRQLSIHDNRAAAASSWSSGDGAESTT
PSPRTNGSAGDDWRSAFDAAANGPLDIGSLSRPASNGHSRYYSNGDVSTGSNSSSRRTPN
RTPNRFPPAPPQSGSSGYRY
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgatcgaagagttgtctcagttatcggagtcgatgaagcaagcaacggcgttg
cttgctgatgaggatgttgatgaaaatccgagttcaagttcaagacggagttcaactttt
cttaacgttgttgctcttggcagtgtaggtgcaggtaaatctgcagttttgaacagtgta
attgggcatcctgttctgccaactggtgaaagtgccactcgggcccctataagcattgac
ttgcagaaagatggttctttgagcagcaaatccattgttttgcagattgacaataaatct
caacaagtttctgcaagtgctttgcggcgttctttgcaggataggctaagtaagggtgtc
actgacaatattcgggatgagatatacctgaaactgcgcacaagcacagcaccttccttg
aaattgattgacttacctggcttgggtcaacggattgtggatgagtctatggttggtgac
tatgcagagcacagtgatgccattttgctagttattgtacctgcagcccaggcacctgaa
attgcttcatatcgagccctcaggattgccaaggagtacgatggagaaggtactagaact
gttggtgtaattagtaaaatagatcaagctgctacggaccagaaagctctcgcggctgtt
caggctctccttctaaatcaagggccaccaaaaaccactgatatcccatggattgcttta
attggtcaatcagtttcaattgcttctgcgcagtctgggtctgaaagctctctggaaact
gcatggaaagcagagagtgaaagtctcaaaacgatactgactggagccccgcagagcaag
ctaggcagaattgctttactagatgctctggcacagcaaattcgtaagcgcatgaaagtt
cggcttccaaatgttctctctggtttgcaagggaagtcacaaacagttcaggatgaacta
atgaggcttggggaacagatggttcaaagtgctgagggcacaagagccatagctttggag
ctttgtcgtgaatttgaggataaatttctccaacacattatgacgggtgagggttctggt
tggaaaattgttgcaagttttgaagggaattttccaaataggatcaagcaacttcctttg
gatagacattttgatatcaataatgttaagaggattgtcttagaagcagatggatatcaa
ccatatcttatatcacctgaaaagggtttaagatccttaataaaaggtgtgctggagctt
gcaaaagaaccatcacgtctctgtgttgatgaggtacatcgtgtcctggtggatatagtt
tctgcttctgcaaatgctacacctggtctgggaagataccctcctttcaagagagaggtt
gtagccattgcaagtgctgcgttagatgggtttaagaatgaatcaaaaaagatggttgtc
gcattggttgatatggagcgagtatttgtgccgccacaacatttcatccgtttggtgcaa
aggaggatggaaagacagcgccgagaggaggagcttaagaaccggtcctcaaagaaagga
aatgatgctgagcaggctatattaaacagggcgactagtcctcaaacaggtggaagtttg
aaatcaatgagagagaaatccaatcaggctgataaggaagtgcaggaggcttctagctta
aaaactgctggtcctgaaggagaactaacagcaggatttttatcaaagaaaagtgcaaag
actaatggatggagcaagcgatggtttgttttgaacgagaagactgggaagcttggttac
acaaaaacacaagaggagagacattttcgtggtgtcatcactttggaggaatgcaacatt
gaagaggttccagatgaggaagaacctccttcaaagagttcaaaggataagaaagtcaat
ggaccagatactaaagctcccagtcttgtatttaagatgaccagcaaggttccatacaaa
accgttttgaaagctcacagtgctgttattttgaaggctgagagcatggctgacaaagtt
gagtggataaacaagatattaaaaattgctcaaccttctaaaggagggaaaatgaggggt
gtatctcctgaaggtggtcctgcaatgcggcatagtctttctgatggctctttggatacg
atggctcgaagacctgccgatccggaagaagaacttcgatggatgtcccaagaagtgcgc
ggatatgtagaggcagttttgaatagcttagctgctaatgttcccaaagcagttgttctt
tgccaagttgagaaagcaaaggaagatatgctaaatcagttgtatagctctatcagcgct
caaagcacagcaaggattgaagagcttcttcaagaggaccagaatgtaaagcgcaggagg
gagcggtaccagaaacagtcctctctcctttcaaagctaacacgccaactcagcatccac
gacaaccgagctgctgctgcttctagctggtctagtggtgatggagcagagagcaccacc
ccaagcccaaggacaaatggttcggctggcgatgactggagatctgcatttgatgcagct
gccaacggtcctttagacattggaagcttatcaagacctgcatcaaatggtcacagtcga
tattacagcaatggtgatgtgagcaccggttccaactccagcagccgtcgcactcctaat
cgcactcctaatcggtttccacccgctcctccacagtctggttcttcaggttacagatat
taa
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