KEGG   Populus trichocarpa (black cottonwood): 18108562
Entry
18108562          CDS       T01077                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    18108562
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    18108562
Enzymes [BR:pop01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     18108562
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    18108562
SSDB
Motif
Pfam: zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 RING_XB3-XBAT31 zf-RING_2 zf-RING_5 zf-C3HC4_4 zf-C3HC4_3 Prok-RING_4 zf-rbx1 zf-RING_11
Other DBs
NCBI-GeneID: 18108562
NCBI-ProteinID: XP_006371566
UniProt: B9N2C6
LinkDB
Position
19:13712415..13715230
AA seq 263 aa
MATEQYLEETVAQNDYNREYKPSLLNWKPIPKTAIDSDDSPSNGFDCNICLDSVQDPVVT
LCGHLYCWPCIYKWLHSQSISAENQDQQPQQQCPVCKAEVSQSTIVPLFGRGQTTKPSMR
KAPNVGIIIPHRPPGLACGFDSPRTPIATGSPRPVQQIHHRHNYPHQSQLHYSQPGSYSA
SPMHSPRGTTINMADPVVGMFGEMIYARVFGNSITNMPSYPNSYHLAGSASPRVRRHVMQ
ADRSLSRICFFLFCCVFLCFLSF
NT seq 792 nt   +upstreamnt  +downstreamnt
atggccacagagcagtacttggaagaaaccgtggctcagaatgactataacagagaatat
aagccatcattgctgaactggaaacctattcctaagacagccatagattctgacgatagc
ccctccaatggttttgattgcaatatttgcctagattccgtgcaggatccagtggtcaca
ctttgtggtcacctctactgctggccctgcatatacaaatggctacactcccagagcatc
tctgctgaaaaccaagatcagcagccacaacagcaatgtcctgtttgcaaagccgaagtt
tcccaatccacaatagttcctctctttggcaggggccaaaccacaaaaccctccatgaga
aaagccccaaatgtcggtataatcattccacatagacctcctggtcttgcctgtgggttt
gactcgccgagaacacctatcgccacaggtagtccacgcccagttcagcaaattcatcat
cgacataattatccacatcagtcacaactccactattcccagccagggagctactctgct
tcccctatgcatagcccaaggggcactacaataaacatggctgatccagtggttgggatg
tttggcgaaatgatatacgcaagggtttttggtaactcgataaccaacatgccgagttac
ccaaattcgtatcatctcgcaggaagtgctagcccaagagtgagaaggcatgtaatgcaa
gctgataggtctctcagcagaatctgcttcttcctcttttgctgtgtatttttatgtttt
ctctcgttctga

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