Populus trichocarpa (black cottonwood): 18108571
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Entry
18108571 CDS
T01077
Name
(RefSeq) expansin-B3 isoform X1
KO
K20628
expansin
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99981 Carbohydrate metabolism
18108571
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GFIT
Motif
Pfam:
Expansin_C
DPBB_1
EXPB1_D1
Cerato-platanin
Motif
Other DBs
NCBI-GeneID:
18108571
NCBI-ProteinID:
XP_006371575
UniProt:
U5FIY0
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Position
19:13780654..13783375
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AA seq
262 aa
AA seq
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MQLLGLYVVVFLKCFLGVFGQQVHPQHNVADLHWKPATATWYGSPDGDGSDGGACGYGSL
VDVKPFRARVGAVSPVLFKNGEGCGACYKVRCLDKSICSRRAVTIIVTDECPGGYCSNGN
THFDLSGAAFGRMAISGENGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSIL
VEFEDGDGDVGSMHIREAGGTEWLEMNHVWGATWCIIRGPLKGPFSVKLTTLTTGRTLSA
REVIPRNWAPKATYTSRLNFFH
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcttggggttatatgttgtggtgttcttaaagtgctttttgggtgtctttggg
cagcaagttcatcctcaacataatgtggctgacttacactggaaaccggctactgccacc
tggtatggcagtcctgacggtgatggtagtgacggaggggcatgtgggtacgggtcatta
gtggatgtgaagccattcagggccagagttggtgcagtgagcccagtactcttcaagaat
ggtgaaggatgtggggcatgttacaaagttaggtgcctagacaagagcatatgctcaaga
agggcagtgaccataattgttacagatgagtgtccaggtgggtattgttccaatggcaac
actcactttgaccttagtggtgcagcctttggtcgcatggctatttccggtgagaatggt
cagctcaggaaccgaggtgaaatcccggtcatttatcgcaggaccccatgcaagtaccca
gggaagaacattgccttccatgtcaatgaaggctcaacagattattggctatccattcta
gtagagtttgaagatggtgacggtgatgttggatcgatgcatataagagaagcaggaggc
actgagtggctagagatgaatcacgtatggggtgcaacttggtgtattatcaggggaccc
ctgaaaggaccattctccgtgaaattaacaacactaacaacaggaagaacactgtctgca
agagaagtgattccaagaaattgggctccaaaagctacttacacctctaggctcaatttc
ttccattaa
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