Populus trichocarpa (black cottonwood): 18108586
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Entry
18108586 CDS
T01077
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.10
KO
K14487
auxin responsive GH3 gene family
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
18108586
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Motif
Pfam:
GH3
GH3_C
GH3_M
Sulfotransfer_3
Chlorovi_GP_rpt
Motif
Other DBs
NCBI-GeneID:
18108586
NCBI-ProteinID:
XP_006371590
UniProt:
B9N2A3
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Position
19:13912619..13916404
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AA seq
595 aa
AA seq
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METKNTNGSRSYEHDIIGWFEDISEKAGQVQTETLRRILDLNWGVEYLKKWLGDIDVRDM
DASALESLYTSLVPLASHADLEPFINRIADGDTAPLLTQQPITLLSLSSGTTEGRQKYVP
FTDHSARTTLQIFSLAAAYRSRVYPIREGGRILEFIYSSKQFKTKGGLTVGTATTHYYAS
EEFKIKQEKTKCFTCSPPEVISGGDYKQSTYCHLLLGLYFGDQVEFITSTFAYSIVQAFR
AFEDVWREICDDIKQGTLSERVLTLPKMRKAVLAIISPNPSLASRIEESCKELETLNWLG
LITKLWPNAKYVYSIMTGSMQPYFKKLRHYAGGLALVSADYGSTESWIGANVDPYLPPED
VTFAVIPTFSYFEFMPLYRENQDCSSAIDDFIEDEPVPLSKVKVGQEYEIVLTTFTGLYR
CRLGDVVEVAGFHKGTPKLNFICRRKLILTINIDKNTEKDLQLVVEKGSQVLTSKGRAEL
VDFTSHAEVEKQPGHYIIYWEIKGEVEEGILGECCKEMDASFADHGYVVSRRTNSIGPLE
LRVVKIGTFKKILDYFIGNGSALSQFKTPRCTSNQGILKILNGSTITRFFSTAYC
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaaaaacaccaatgggtcaagaagctacgagcatgacattatcggttggttt
gaggacatatccgagaaggccggccaagtccagaccgagactcttcgccgaattcttgat
ctcaactggggtgtggagtatctcaagaaatggttaggggatattgatgtccgagatatg
gatgcaagtgcattggagtctctttacacttctttggtgcctcttgcttcccatgcagat
ttagagcctttcattaacagaattgcagatggggatactgctcctttactcactcaacag
cccataacacttctatccttaagctctggaaccacagaaggaaggcagaagtacgttcct
ttcactgaccatagtgcccgaaccactcttcagattttcagcttggcagcagcctacaga
tcaagggtttatccaataagggaaggaggaaggatccttgagttcatatacagcagtaaa
caattcaaaacaaaaggagggttaacagtaggaacagctacaacccattattatgcaagt
gaggagttcaagatcaagcaagaaaaaacaaagtgcttcacttgtagtccaccagaagtc
atttctggtggagactacaagcaatctacttattgtcatcttctccttggcctctacttc
ggtgatcaagtagagtttataacatctacctttgcttacagcatagttcaagcctttaga
gcatttgaagatgtttggagagaaatatgcgatgacattaaacaaggtactctaagtgaa
agagtactcaccttgccaaagatgagaaaagctgtgctggctatcatctctccaaatcca
agcttagcttcaagaatagaagaaagctgcaaggagttggaaactctaaactggcttggt
ttgattactaaactctggccaaatgccaagtatgtttactccataatgacaggctccatg
caaccttactttaaaaaactaaggcattatgctgggggcttggcattagtgagtgctgat
tatggatcaacagagagttggatcggagctaatgtggatccttatttgcctcctgaagat
gttacttttgcagtaatacccactttttcatactttgagttcatgccactttatagagag
aatcaagattgtagctcagccattgatgacttcattgaagatgagccagtaccactctca
aaagttaaggttgggcaggagtatgagattgtcctcactacttttaccgggctttataga
tgcaggctaggggatgtggtggaagtggctggctttcacaaagggacaccgaaattgaac
tttatatgcaggagaaagctaattttaaccataaacattgacaagaacactgaaaaagat
ttacaattagtggtggagaaagggtctcaggtactcacgagcaagggtagagcagaacta
gtggattttactagccatgccgaggtagaaaagcaaccaggtcactacataatttactgg
gaaatcaaaggagaggtcgaggaagggattcttggcgagtgttgcaaggaaatggatgca
tcgtttgctgatcatggctatgtggtatcaagaagaaccaactccattggacctctcgag
cttcgcgttgttaagatagggactttcaagaagatcttggactatttcataggcaatggg
tcagcattgagccagttcaagactcctaggtgcactagcaaccaaggaatattgaaaatt
ctcaatggtagcaccattacgaggttcttcagcactgcatattgttag
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