Populus trichocarpa (black cottonwood): 18108745
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Entry
18108745 CDS
T01077
Name
(RefSeq) aspartic proteinase PCS1
KO
K22683
aspartyl protease family protein [EC:3.4.23.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pop01002
]
18108745
Peptidases and inhibitors [BR:
pop01002
]
Aspartic peptidases
Family A1: pepsin family
18108745
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Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
18108745
NCBI-ProteinID:
XP_006387010
UniProt:
U7DUP9
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Position
6:complement(6604662..6606613)
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AA seq
453 aa
AA seq
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MFHSIMESTSIPCTSYTNPYLKSLFLLSHTVLTLLLIMESQHCLSSSPKMLILPLKTQVI
PSGSVPRSPNKLPFHHNVSLIVSLTVGTPPQNVSMVIDTGSELSWLHCNKTLSYPTTFDP
TRSTSYQTIPCSSPTCTNRTQDFPIPASCDSNNLCHATLSYADASSSDGNLASDVIHIGS
SDISGLVFGCMDSVFSSNSDEDSKSTGLMGMNRGSLSFVSQLGFPKFSYCISGTDFSGLL
LLGESNLTWSVPLNYTPLIQISTPLPYFDRVAYTVQLEGIKVLDKLLPIPKSTFEPDHTG
AGQTMVDSGTQFTFLLGPVYNALRSAFLNQTSSVLRVLEDPDFVFQGAMDLCYLVPLSQR
VLPLLPTVTLVFRGAEMTVSGDRVLYRVPGELRGNDSVHCLSFGNSDLLGVEAYVIGHHH
QQNVWMEFDLEKSRIGLAQVRCDLAGQRFGVAL
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttcattccatcatggaaagcacttccattccctgcacttcttacacaaacccatat
ctcaaatccctttttcttctctctcacactgtcttaacacttctcttgattatggaatct
caacactgcttgtcttcttcaccaaaaatgctgatcctgccactcaaaacccaagttatc
ccttccgggtcagtacccagatcaccaaacaagcttcctttccaccacaatgtgagtctt
atcgtctctctcacggttggcactccaccacaaaatgtctccatggttattgacaccgga
agtgaactctcctggctgcattgcaacaaaacactatcctacccaactacattcgacccg
acccgatccacatcttaccaaaccatcccttgttcttcacccacctgcaccaatcggacc
caggacttccctatacctgcttcatgtgactccaataatctctgccacgccaccctttct
tatgctgacgcttcgtcctccgatggaaatctcgcgtccgatgttatccacattgggagc
tccgatatttccggtttggtctttgggtgcatggattcggttttcagttctaactctgat
gaggattctaagagtaccggtttaatgggcatgaaccgtgggtcgctctcttttgtttcc
caattgggtttcccgaaattctcttattgcatttcaggaaccgatttttcgggtctttta
cttctcggcgagtccaatttgacgtggtcggtgccattaaactacacccccttaatccaa
atatcaaccccattgccttactttgatcgggttgcctacacggtacagcttgaaggcatt
aaagttttagataagttgcttcctataccgaaatcaactttcgaaccggatcatacaggt
gctggtcaaaccatggttgactcgggaacccagttcacgttcttactcggacctgtttac
aatgctttgagaagcgcgtttctgaaccaaaccagcagtgttttaagggttttagaggat
ccagattttgtatttcaaggggctatggatttatgttacctggtcccgctaagtcaacgt
gttttaccactgttgccaacggtaactttagtgtttcggggagccgaaatgacagtatcg
ggtgatagggtattatatcgggtcccgggtgaattgaggggaaatgactcggtgcattgc
ttgtcatttgggaactctgatttgttgggtgtggaagcatatgtgattggtcatcatcac
caacaaaacgtgtggatggaatttgatcttgagaaatcaaggattggattggctcaggta
cggtgtgatttggctggccagagatttggtgtggccctgtag
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